RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 FUT9Q9Y231 359 aa12.49□□□□□ -0.41
SPG11-210ENST00000558319 NUP98P52948 1817 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 TSPAN12O95859 305 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 SLC38A11Q08AI6 406 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 ZNF766Q5HY98 468 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 SYS1Q8N2H4 156 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 TTC9Q92623 222 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 LRRC61Q9BV99 259 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 HES4Q9HCC6 221 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 CBR3O75828 277 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 SCGB1D4Q6XE38 83 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 ARHGAP5-AS1Q96IT6 56 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 POM121L2Q96KW2 1035 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 CYSLTR2Q9NS75 346 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 OR4C46A6NHA9 309 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 DNASE2O00115 360 aaPredicted RBP12.48□□□□□ -0.41
SPG11-210ENST00000558319 DNPH1O43598 174 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 EIF4E2O60573 245 aaKnown RBP12.48□□□□□ -0.41
SPG11-210ENST00000558319 FBP1P09467 338 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 ATF1P18846 271 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 COMPP49747 757 aaPredicted RBP12.48□□□□□ -0.41
SPG11-210ENST00000558319 PRSS41Q7RTY9 318 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 KTI12Q96EK9 354 aaPredicted RBP12.48□□□□□ -0.41
SPG11-210ENST00000558319 ADAT1Q9BUB4 502 aaKnown RBP12.48□□□□□ -0.41
SPG11-210ENST00000558319 AAMDCQ9H7C9 122 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 AMDHD2Q9Y303 409 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 UFC1Q9Y3C8 167 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 ASCC3Q8N3C0 2202 aaKnown RBP12.48□□□□□ -0.41
SPG11-210ENST00000558319 HLA-DRB3P79483 266 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 RTP5Q14D33 572 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 PTOV1Q86YD1 416 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 UQCC1Q9NVA1 299 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 IGHV3-21A0A0B4J1V1 117 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 PPP1CAP62136 330 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 GABRA6Q16445 453 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 RNFT1Q5M7Z0 435 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 XAF1Q6GPH4 301 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 LYPD8Q6UX82 237 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 TMEM208Q9BTX3 173 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 LPAR3Q9UBY5 353 aa12.48□□□□□ -0.41
SPG11-210ENST00000558319 C19orf53Q9UNZ5 99 aaPredicted RBP12.48□□□□□ -0.41
SPG11-210ENST00000558319 DSCR3O14972 297 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 FPR2P25090 351 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 MVDP53602 400 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 DLK1P80370 383 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 TMEM196Q5HYL7 178 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 FDX2Q6P4F2 183 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 MUC15Q8N387 334 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 RHOVQ96L33 236 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 FBXL17Q9UF56 701 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 OR5B21A6NL26 309 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 DYNLT3P51808 116 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 SHBQ15464 509 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 HLA-DRB5Q30154 266 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 OR4A47Q6IF82 309 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 TMEM116Q8NCL8 245 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 PCED1AQ9H1Q7 454 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 LYRM4Q9HD34 91 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 LRP12Q9Y561 859 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 RBFOX3A6NFN3 312 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 FIGNL2A6NMB9 653 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 MPC2O95563 127 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 CD22P20273 847 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 CEACAM6P40199 344 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 CRYBB2P43320 205 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 UQCRFS1P47985 274 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 ELOBQ15370 118 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 WDR73Q6P4I2 378 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 TRAT1Q6PIZ9 186 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 UPK1AO00322 258 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 STARD4Q96DR4 205 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 MYH14Q7Z406 1995 aaKnown RBP12.47□□□□□ -0.41
SPG11-210ENST00000558319 SIGLEC5O15389 551 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 SNRPCP09234 159 aaKnown RBP12.47□□□□□ -0.41
SPG11-210ENST00000558319 SIGLEC14Q08ET2 396 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 MRM1Q6IN84 353 aaKnown RBP12.47□□□□□ -0.41
SPG11-210ENST00000558319 MAP1LC3CQ9BXW4 147 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 ZNF552Q9H707 407 aaPredicted RBP12.47□□□□□ -0.41
SPG11-210ENST00000558319 FKBP11Q9NYL4 201 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 SERGEFQ9UGK8 458 aa12.47□□□□□ -0.41
SPG11-210ENST00000558319 CDK5RAP2Q96SN8 1893 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 A0A1B0GTH9 108 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 CDRT15L2A8MXV6 281 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 F12P00748 615 aaPredicted RBP12.46□□□□□ -0.41
SPG11-210ENST00000558319 HPXP02790 462 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 PKIAP61925 76 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 TPBGQ13641 420 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 TMEM251Q8N6I4 163 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 OR8A1Q8NGG7 326 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 TMEM30AQ9NV96 361 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 ATXN7O15265 892 aaPredicted RBP12.46□□□□□ -0.41
SPG11-210ENST00000558319 SEMA7AO75326 666 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 ZNF253O75346 499 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 IGHA1P01876 353 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 IGHA2P01877 340 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 FOXL2P58012 376 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 HIST3H3Q16695 136 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 B3GNTL1Q67FW5 361 aaPredicted RBP12.46□□□□□ -0.41
SPG11-210ENST00000558319 GVQW1Q8N7I0 195 aa12.46□□□□□ -0.41
SPG11-210ENST00000558319 PCOLCE2Q9UKZ9 415 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms