RNA–Protein interactions for RNA: ENST00000558218.5

USP3-207, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-207ENST00000558218 DUX4L4P0CJ87 422 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 DUX4L5P0CJ88 424 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 DUX4L6P0CJ89 424 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 DUX4L7P0CJ90 424 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 NDUFB7P17568 137 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 FSTP19883 344 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 PRDX2P32119 198 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 IER3P46695 156 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 GABRA2P47869 451 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 UBE2E1P51965 193 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 FUT6P51993 359 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 ISL1P61371 349 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 ERVK11-1P61568 191 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 PRR31Q5SQ13 230 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 TMEM244Q5VVB8 128 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 RUSC1-AS1Q66K80 236 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 DUX4L9Q6RFH8 374 aaPredicted RBP8.3□□□□□ -1.08
USP3-207ENST00000558218 Q8N7P7 452 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 DNAAF1Q8NEP3 725 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 OR10H4Q8NGA5 316 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 PYDC1Q8WXC3 89 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 PP6455Q8WZ26 134 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 H1FXQ92522 213 aaKnown RBP8.3□□□□□ -1.08
USP3-207ENST00000558218 RORBQ92753 470 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 TNFRSF14Q92956 283 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 MRPL48Q96GC5 212 aaKnown RBP8.3□□□□□ -1.08
USP3-207ENST00000558218 NRIP2Q9BQI9 281 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 HES4Q9HCC6 221 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 ONECUT1Q9UBC0 465 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 DUX4Q9UBX2 424 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 GTF2A1LQ9UNN4 478 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 SF3B6Q9Y3B4 125 aaKnown RBP8.3□□□□□ -1.08
USP3-207ENST00000558218 NBEAL1Q6ZS30 2694 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 TENM1Q9UKZ4 2725 aa8.3□□□□□ -1.08
USP3-207ENST00000558218 MDFIC2A0A1B0GVS7 189 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 A0A1W2PQ09 198 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 SAC3D1A6NKF1 404 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 RFPL4AA6NLU0 287 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 RFPL4AL1F8VTS6 287 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 H3BNX3 289 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 J3QRE1 110 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 MAGEB4O15481 346 aaPredicted RBP8.29□□□□□ -1.08
USP3-207ENST00000558218 RPP14O95059 124 aaKnown RBP8.29□□□□□ -1.08
USP3-207ENST00000558218 KNG1P01042 644 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 UBCP0CG48 685 aaKnown RBP8.29□□□□□ -1.08
USP3-207ENST00000558218 CCR9P51686 369 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 GMFBP60983 142 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 ELF3P78545 371 aaPredicted RBP8.29□□□□□ -1.08
USP3-207ENST00000558218 MIDNQ504T8 468 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 FIP1L1Q6UN15 594 aaKnown RBP8.29□□□□□ -1.08
USP3-207ENST00000558218 GDPGP1Q6ZNW5 385 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 SSX6Q7RTT6 188 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 FAM220AQ7Z4H9 259 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 ZNRF1Q8ND25 227 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 HAVCR2Q8TDQ0 301 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 Q96MT0 163 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 C9orf16Q9BUW7 83 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 TTTY10Q9BZA0 68 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 CHIAQ9BZP6 476 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 CHST5Q9GZS9 411 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 PLEKHA1Q9HB21 404 aa8.29□□□□□ -1.08
USP3-207ENST00000558218 EXOGQ9Y2C4 368 aaKnown RBP8.29□□□□□ -1.08
USP3-207ENST00000558218 A0A0U1RQK1 487 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 CLPSL1A2RUU4 121 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 BTBD17A6NE02 478 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 RNASEK-C17orf49H0YIS7 233 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 EBAG9O00559 213 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 NPFFO15130 113 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 SPRY1O43609 319 aaPredicted RBP8.28□□□□□ -1.08
USP3-207ENST00000558218 NXPH2O95156 264 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 CHRM2P08172 466 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 RPL31P62899 125 aaKnown RBP8.28□□□□□ -1.08
USP3-207ENST00000558218 ZNF85Q03923 595 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 MRPL28Q13084 256 aaKnown RBP8.28□□□□□ -1.08
USP3-207ENST00000558218 KPNB1Q14974 876 aaKnown RBP8.28□□□□□ -1.08
USP3-207ENST00000558218 CNN3Q15417 329 aaKnown RBP8.28□□□□□ -1.08
USP3-207ENST00000558218 UBE2V2Q15819 145 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 AANATQ16613 207 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 UTS2BQ765I0 119 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 Q8IYB0 196 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 ENTHD1Q8IYW4 607 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 FGFRL1Q8N441 504 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 ACBD7Q8N6N7 88 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 CD177Q8N6Q3 437 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 DTX3Q8N9I9 347 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 TMEM185AQ8NFB2 350 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 OR5R1Q8NH85 324 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 TBX5Q99593 518 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 HEXA-AS1Q9H8Q6 139 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 GPR173Q9NS66 373 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 C1RLQ9NZP8 487 aa8.28□□□□□ -1.08
USP3-207ENST00000558218 DAPL1A0PJW8 107 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 H0YAE9 185 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 K7N7A8 449 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 EI24O14681 340 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 SLC16A6O15403 523 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 SYNGR1O43759 233 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 ENTPD6O75354 484 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 CYB5AP00167 134 aa8.27□□□□□ -1.09
USP3-207ENST00000558218 PAHP00439 452 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms