RNA–Protein interactions for RNA: ENST00000557685.5

EFCAB11-213, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 3

Gene EFCAB11, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-213ENST00000557685 SLC5A10A0PJK1 596 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 TVP23AA6NH52 213 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 UPK1AO00322 258 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 TCAPO15273 167 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 ZMPSTE24O75844 475 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 S100A9P06702 114 aaKnown RBP2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 IVLP07476 585 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 CD9P21926 228 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 HLA-DMAP28067 261 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 GPR4P46093 362 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 ATP5J2P56134 94 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 RBX1P62877 108 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 XIAPP98170 497 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 IL5RAQ01344 420 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 ATP5G2Q06055 141 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 KCTD16Q68DU8 428 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 TBPL2Q6SJ96 375 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 CYP4Z2PQ8N1L4 340 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 OR4K2Q8NGD2 314 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 ZNF420Q8TAQ5 688 aaPredicted RBP2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 FAM57AQ8TBR7 257 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 CACNG8Q8WXS5 425 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 YIPF6Q96EC8 236 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 SMIM8Q96KF7 97 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 DERL3Q96Q80 235 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 SPACA5Q96QH8 159 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 OR2M4Q96R27 311 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 MRPL20Q9BYC9 149 aaKnown RBP2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 C12orf4Q9NQ89 552 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 SDHAF2Q9NX18 166 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 STMN3Q9NZ72 180 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 DHCR7Q9UBM7 475 aaKnown RBP2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 SEC16AO15027 2179 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 PLXNB3Q9ULL4 1909 aa2.29□□□□□ -2.04
EFCAB11-213ENST00000557685 RPRD2Q5VT52 1461 aaKnown RBP2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 GOLGA6L4A6NEF3 574 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 OR6C70A6NIJ9 312 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 K7EN84 100 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 NDUFS8O00217 210 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 CNMDO75829 334 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 IGKV1D-16P01601 117 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 IGHV1-46P01743 117 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 SNRPAP09012 282 aaKnown RBP2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 RNASE2P10153 161 aaKnown RBP2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 CCNOP22674 350 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 HTR2BP41595 481 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 TGM4P49221 684 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 OR12D2P58182 307 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 RPL10AP62906 217 aaKnown RBP2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 MEF2CQ06413 473 aaPredicted RBP2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 PMVKQ15126 192 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 LINC00303Q3SY05 128 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 IDNKQ5T6J7 187 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 ZFAND6Q6FIF0 208 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 CLEC19AQ6UXS0 136 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 FAM231DQ6ZW35 169 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 ITPRIPQ8IWB1 547 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 OR1P1Q8NH06 330 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 LGALS14Q8TCE9 139 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 CDKL2Q92772 493 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 LRRC39Q96DD0 335 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 GLT1D1Q96MS3 346 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 SLC38A1Q9H2H9 487 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 PARP11Q9NR21 331 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 RBM22Q9NW64 420 aaKnown RBP eCLIP2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 ANXA10Q9UJ72 324 aa2.28□□□□□ -2.04
EFCAB11-213ENST00000557685 SHANK1Q9Y566 2161 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 BOLA2-SMG1P6H3BVE0 249 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 RNF113AO15541 343 aaKnown RBP2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 SC5DO75845 299 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 PFN1P07737 140 aaKnown RBP2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 DNASE1L1P49184 302 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 NUDT2P50583 147 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 FLI1Q01543 452 aaPredicted RBP2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 FAM53BQ14153 422 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 ATP6AP1LQ52LC2 224 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 TMEM69Q5SWH9 247 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 PP632Q6XCG6 107 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 TRMT10CQ7L0Y3 403 aaKnown RBP2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 DAZ4Q86SG3 579 aaKnown RBP2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 LRRC8AQ8IWT6 810 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 SGPP2Q8IWX5 399 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 CCNYL1Q8N7R7 359 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 ZNF680Q8NEM1 530 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 LRRC20Q8TCA0 184 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 DOK4Q8TEW6 326 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 MSANTD3Q96H12 275 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 VAT1Q99536 393 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 SIKE1Q9BRV8 207 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 TSGA10Q9BZW7 698 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 PORCNQ9H237 461 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 LHX5Q9H2C1 402 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 RDH14Q9HBH5 336 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 SND1-IT1Q9HBX3 110 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 ABCB9Q9NP78 766 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 DAZ1Q9NQZ3 744 aaKnown RBP2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 DDIT4Q9NX09 232 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 STK38LQ9Y2H1 464 aa2.27□□□□□ -2.05
EFCAB11-213ENST00000557685 KLF13Q9Y2Y9 288 aaPredicted RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms