RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 ERVH48-1M5A8F1 160 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 TPD52L2O43399 206 aaKnown RBP10.67□□□□□ -0.7
SHMT2-233ENST00000557529 SSX5O60225 188 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 RAB3DO95716 219 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 CD74P04233 296 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 CD3DP04234 171 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 H2AFB2P0C5Z0 115 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 PPP3CBP16298 524 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 MPZP25189 248 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 HLA-DMAP28067 261 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 MPV17P39210 176 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 RBM11P57052 281 aaKnown RBP10.67□□□□□ -0.7
SHMT2-233ENST00000557529 RPS23P62266 143 aaKnown RBP10.67□□□□□ -0.7
SHMT2-233ENST00000557529 IL24Q13007 206 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 OR8G1Q15617 311 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 NHLRC3Q5JS37 347 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 SFRP4Q6FHJ7 346 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-233ENST00000557529 RGS7BPQ6MZT1 257 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-233ENST00000557529 ZNF782Q6ZMW2 699 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-233ENST00000557529 LIX1LQ8IVB5 337 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 FBXL14Q8N1E6 418 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 OR8G5Q8NG78 346 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 DVL3Q92997 716 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-233ENST00000557529 OCSTAMPQ9BR26 566 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 ADAT1Q9BUB4 502 aaKnown RBP10.67□□□□□ -0.7
SHMT2-233ENST00000557529 OR51I2Q9H344 312 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 RHOFQ9HBH0 211 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 TMEM100Q9NV29 134 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 PLEKHJ1Q9NW61 149 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 ANAPC10Q9UM13 185 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 ST3GAL6Q9Y274 331 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 PLEKHA6Q9Y2H5 1048 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 KCNK7Q9Y2U2 307 aa10.67□□□□□ -0.7
SHMT2-233ENST00000557529 RP1L1Q8IWN7 2480 aaPredicted RBP10.67□□□□□ -0.7
SHMT2-233ENST00000557529 TRAV6A0A075B6T7 132 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 TMEM210A6NLX4 147 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 DISC1C4P0D8 188 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 J3QT63 122 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 TIMM8AO60220 97 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-233ENST00000557529 NDUFB6O95139 128 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 HNRNPCP07910 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
SHMT2-233ENST00000557529 SFTPBP07988 381 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 NAT1P18440 290 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 CCKARP32238 428 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 PMELP40967 661 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 FGF12P61328 243 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 ZMYND11Q15326 602 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 RBMS2Q15434 407 aaKnown RBP10.66□□□□□ -0.7
SHMT2-233ENST00000557529 TAF9Q16594 264 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 ACTBL2Q562R1 376 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 ALKBH2Q6NS38 261 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 HAGHLQ6PII5 290 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-233ENST00000557529 NCCRP1Q6ZVX7 275 aaPredicted RBP10.66□□□□□ -0.7
SHMT2-233ENST00000557529 AKAP14Q86UN6 197 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 SPERTQ8NA61 448 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 SLAMF9Q96A28 289 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 C20orf85Q9H1P6 137 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 PLK3Q9H4B4 646 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 ALG5Q9Y673 324 aa10.66□□□□□ -0.7
SHMT2-233ENST00000557529 A0A0B4J293 547 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 HMX3A6NHT5 357 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 PRAF2O60831 178 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 BCL3P20749 454 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 CHATP28329 748 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 GLRXP35754 106 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 ASCL1P50553 236 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 FABP6P51161 128 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 MRPS15P82914 257 aaKnown RBP10.65□□□□□ -0.7
SHMT2-233ENST00000557529 MZT1Q08AG7 82 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 CARTPTQ16568 116 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 RNASE10Q5GAN6 216 aaKnown RBP10.65□□□□□ -0.7
SHMT2-233ENST00000557529 FAM76BQ5HYJ3 339 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 NKAPLQ5M9Q1 402 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 FAAP20Q6NZ36 180 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 SEZ6L2Q6UXD5 910 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 TMEM108Q6UXF1 575 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 LINC00596Q86U02 117 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 Q8IYB0 196 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 MTCH1Q9NZJ7 389 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 SCP2D1Q9UJQ7 156 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 OSGIN2Q9Y236 505 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 POLDIP2Q9Y2S7 368 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 SPTA1P02549 2419 aa10.65□□□□□ -0.7
SHMT2-233ENST00000557529 C7orf66A4D0T2 115 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 CCL21O00585 134 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 GEMIN2O14893 280 aaKnown RBP10.65□□□□□ -0.71
SHMT2-233ENST00000557529 PDCD6O75340 191 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 PEX14O75381 377 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 AMY2AP04746 511 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 FUT3P21217 361 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 PTAFRP25105 342 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 CD40P25942 277 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 CHRNB4P30926 498 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 NPBWR2P48146 333 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 RAB25P57735 213 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 NKX6-1P78426 367 aaPredicted RBP10.65□□□□□ -0.71
SHMT2-233ENST00000557529 LY6DQ14210 128 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 MPV17LQ2QL34 196 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 ALKBH6Q3KRA9 238 aa10.65□□□□□ -0.71
SHMT2-233ENST00000557529 PIGYQ3MUY2 71 aa10.65□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms