RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 NRASP01111 189 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 IGLV3-1P01715 115 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 TTRP02766 147 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 CD24P25063 80 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 VDAC2P45880 294 aaPredicted RBP11.32□□□□□ -0.6
SLIRP-210ENST00000557431 EDDM3BP56851 147 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 ESRRGP62508 458 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 RIPPLY1Q0D2K3 151 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 ZNF684Q5T5D7 378 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 C10orf99Q6UWK7 81 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 CCDC121Q6ZUS5 278 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 ANGPTL5Q86XS5 388 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 CALHM1Q8IU99 346 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 ASCC1Q8N9N2 400 aaKnown RBP11.32□□□□□ -0.6
SLIRP-210ENST00000557431 RPS4Y2Q8TD47 263 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 PRSS22Q9GZN4 317 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 MAGIXQ9H6Y5 334 aa11.32□□□□□ -0.6
SLIRP-210ENST00000557431 A0A1W2PPH5 198 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 WI2-2373I1.2A0A1W2PRP0 233 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 CCDC182A6NF36 153 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 VGLL3A8MV65 326 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 J3QT63 122 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 M0R129 80 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 GSC2O15499 205 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 PRODHO43272 600 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 PRKACGP22612 351 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 EDDM3AQ14507 147 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 VAX1Q5SQQ9 334 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 ZNF626Q68DY1 528 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 BAIAP2L2Q6UXY1 529 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 CD300LDQ6UXZ3 194 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 BCDIN3DQ7Z5W3 292 aaKnown RBP11.31□□□□□ -0.6
SLIRP-210ENST00000557431 SLC7A6OSQ96CW6 309 aaPredicted RBP11.31□□□□□ -0.6
SLIRP-210ENST00000557431 ASB9Q96DX5 294 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 OCSTAMPQ9BR26 566 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 THTPAQ9BU02 230 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 RASL12Q9NYN1 266 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 ENPP5Q9UJA9 477 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 IKZF2Q9UKS7 526 aa11.31□□□□□ -0.6
SLIRP-210ENST00000557431 TBL2Q9Y4P3 447 aaKnown RBP11.31□□□□□ -0.6
SLIRP-210ENST00000557431 NBEAL2Q6ZNJ1 2754 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 PQLC2LA1A4F0 135 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 F2RL2O00254 374 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 GYG2O15488 501 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 DHRS3O75911 302 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 CST1P01037 141 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 IGHV1-8P0DP01 117 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 PF4V1P10720 104 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 KRTAP10-11P60412 298 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 SLC34A1Q06495 639 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 ODF4Q2M2E3 257 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 FAM98BQ52LJ0 330 aaKnown RBP11.3□□□□□ -0.6
SLIRP-210ENST00000557431 TCTEX1D4Q5JR98 221 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 KRT74Q7RTS7 529 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 OR5AU1Q8NGC0 362 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 CCDC124Q96CT7 223 aaKnown RBP11.3□□□□□ -0.6
SLIRP-210ENST00000557431 APOL4Q9BPW4 351 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 NRIP2Q9BQI9 281 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 IL36RNQ9UBH0 155 aa11.3□□□□□ -0.6
SLIRP-210ENST00000557431 hCG_1809904A0A1W2PP81 198 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 A0A1W2PPE2 198 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 FAM230AA0A1W2PPH8 454 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 A0A1W2PR64 198 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 A0A1W2PRV1 198 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 FAM172BPA6NC97 362 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 K7N7A8 449 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 SRSF10O75494 262 aaKnown RBP11.29□□□□□ -0.6
SLIRP-210ENST00000557431 MMP23AO75900 390 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 ZNF728P0DKX0 622 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 CALCBP10092 127 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 HOXD3P31249 432 aaPredicted RBP11.29□□□□□ -0.6
SLIRP-210ENST00000557431 RIDAP52758 137 aaKnown RBP11.29□□□□□ -0.6
SLIRP-210ENST00000557431 ACTA2P62736 377 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 ACTG2P63267 376 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 ACTC1P68032 377 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 ACTA1P68133 377 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 CDK5Q00535 292 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 CD83Q01151 205 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 DNAL1Q4LDG9 190 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 DEFB121Q5J5C9 76 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 SLC35D3Q5M8T2 416 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 CLVS2Q5SYC1 327 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 OR13D1Q8NGV5 346 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 OR14K1Q8NGZ2 314 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 NDNFQ8TB73 568 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 SLAMF9Q96A28 289 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 FOXRED1Q96CU9 486 aaPredicted RBP11.29□□□□□ -0.6
SLIRP-210ENST00000557431 MALSU1Q96EH3 234 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 LRGUKQ96M69 825 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 MROQ9BYG7 248 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 HES4Q9HCC6 221 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 TVP23BQ9NYZ1 205 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 NUFIP1Q9UHK0 495 aaKnown RBP11.29□□□□□ -0.6
SLIRP-210ENST00000557431 SLC22A13Q9Y226 551 aa11.29□□□□□ -0.6
SLIRP-210ENST00000557431 COL7A1Q02388 2944 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 RYR3Q15413 4870 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 IGKV1-27A0A075B6S5 117 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 A0A1B0GTI1 187 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 TMEM82A0PJX8 343 aa11.28□□□□□ -0.6
SLIRP-210ENST00000557431 LOC110117498-PIK3R3F6TDL0 507 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms