RNA–Protein interactions for RNA: ENST00000557427.5

SHMT2-230, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-230ENST00000557427 RPS23P62266 143 aaKnown RBP10.57□□□□□ -0.72
SHMT2-230ENST00000557427 GRB2P62993 217 aaKnown RBP10.57□□□□□ -0.72
SHMT2-230ENST00000557427 PSG4Q00888 419 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 TBC1D28Q2M2D7 210 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 NRN1LQ496H8 165 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 FAM27BQ5VT28 67 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 GLT8D1Q68CQ7 371 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 ASPHD2Q6ICH7 369 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 RGS7BPQ6MZT1 257 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-230ENST00000557427 PLET1Q6UQ28 207 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 AKAP14Q86UN6 197 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 OR13C3Q8NGS6 347 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 SYNPRQ8TBG9 265 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 UBASH3BQ8TF42 649 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 SMIM4Q8WVI0 70 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 NEU4Q8WWR8 484 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-230ENST00000557427 YIPF5Q969M3 257 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 NARFLQ9H6Q4 476 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 PNRC2Q9NPJ4 139 aaKnown RBP10.57□□□□□ -0.72
SHMT2-230ENST00000557427 DDX28Q9NUL7 540 aaKnown RBP10.57□□□□□ -0.72
SHMT2-230ENST00000557427 MYEF2Q9P2K5 600 aaKnown RBP10.57□□□□□ -0.72
SHMT2-230ENST00000557427 FBXO9Q9UK97 447 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-230ENST00000557427 TIMM10BQ9Y5J6 103 aa10.57□□□□□ -0.72
SHMT2-230ENST00000557427 FAM240BA0A1B0GVZ2 78 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 MEIOCA2RUB1 952 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 C5orf49A4QMS7 147 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 A6NIN4 97 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 LANCL1O43813 399 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 ACSM4P0C7M7 580 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 NAT2P11245 290 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 HSD11B1P28845 292 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 CLDN12P56749 244 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 HIST1H3AP68431 136 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 SRSF4Q08170 494 aaKnown RBP10.56□□□□□ -0.72
SHMT2-230ENST00000557427 GPR176Q14439 515 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 TAF13Q15543 124 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 RAB11BQ15907 218 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 HIST2H3PS2Q5TEC6 136 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 ZNF774Q6NX45 483 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 HIST2H3AQ71DI3 136 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 NKAIN3Q8N8D7 197 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 DTX3Q8N9I9 347 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 DNAAF1Q8NEP3 725 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 C22orf15Q8WYQ4 148 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 TMPRSS13Q9BYE2 586 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 OR2H1Q9GZK4 316 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 PBOV1Q9GZY1 135 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 MMP28Q9H239 520 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 ZNF275Q9NSD4 429 aaPredicted RBP10.56□□□□□ -0.72
SHMT2-230ENST00000557427 TREM2Q9NZC2 230 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 TAAR3PQ9P1P4 343 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 ASH2LQ9UBL3 628 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 CACNG2Q9Y698 323 aa10.56□□□□□ -0.72
SHMT2-230ENST00000557427 LOC100509620A0A075B734 347 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 HMX3A6NHT5 357 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 CENPXA8MT69 81 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 GABARAPH6UMI1 98 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 M0R233 179 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 P2RY10O00398 339 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 CST2P09228 141 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 COL8A2P25067 703 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 SLC6A1P30531 599 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 CAPZA1P52907 286 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 SELENOVP59797 346 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 PCBD1P61457 104 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 DGCR2P98153 550 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 DYRK1AQ13627 763 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 ENDOGQ14249 297 aaKnown RBP10.55□□□□□ -0.72
SHMT2-230ENST00000557427 NKPD1Q17RQ9 610 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 TUSC1Q2TAM9 212 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 C1orf100Q5SVJ3 147 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 SPATA46Q5T0L3 261 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 C1QL2Q7Z5L3 287 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 C1QL4Q86Z23 238 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 TOMM5Q8N4H5 51 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 GJC3Q8NFK1 279 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 OR6M1Q8NGM8 313 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 OR1J1Q8NGS3 322 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 FOXRED1Q96CU9 486 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-230ENST00000557427 C1orf147Q96MC9 270 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-230ENST00000557427 DUX5Q96PT3 197 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 MARVELD1Q9BSK0 173 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 ZNF416Q9BWM5 594 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 WNT5BQ9H1J7 359 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 MS4A5Q9H3V2 200 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 TAS2R4Q9NYW5 299 aa10.55□□□□□ -0.72
SHMT2-230ENST00000557427 EIF3KQ9UBQ5 218 aaKnown RBP10.55□□□□□ -0.72
SHMT2-230ENST00000557427 A0A1B0GTI1 187 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 A0A1B0GVI7 797 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 POM121CA8CG34 1229 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 H3BSH0 61 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 SYT7O43581 403 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 ECDO95905 644 aaPredicted RBP10.54□□□□□ -0.72
SHMT2-230ENST00000557427 HPXP02790 462 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 CD3GP09693 182 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 CCL1P22362 96 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 HLA-DMAP28067 261 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 DDOSTP39656 456 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 WNT5AP41221 380 aa10.54□□□□□ -0.72
SHMT2-230ENST00000557427 TPTEP56180 551 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms