RNA–Protein interactions for RNA: ENST00000557342.5

SLIRP-209, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 1 (best) BASIC

Gene SLIRP, Length 408 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-209ENST00000557342 OPALINQ96PE5 141 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 GAFA1Q96PS6 74 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 NRIP2Q9BQI9 281 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 ZCCHC4Q9H5U6 513 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 OCEL1Q9H607 264 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 CLEC2DQ9UHP7 191 aa10.36□□□□□ -0.75
SLIRP-209ENST00000557342 IGKV1D-17A0A075B6S4 117 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 IGKV1-27A0A075B6S5 117 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 A0A0A6YYJ9 748 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 IGKV1-9A0A0C4DH69 117 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 MYL12BO14950 172 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 TCF21O43680 179 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 FSHBP01225 129 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 CD2P06729 351 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 AMY2BP19961 511 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 MYF6P23409 242 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 CAV3P56539 151 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 Q8IYB0 196 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 ZNF561Q8N587 486 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 ZNF418Q8TF45 676 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-209ENST00000557342 MYDGFQ969H8 173 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 UPRTQ96BW1 309 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 SMIM19Q96E16 107 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 CPNE2Q96FN4 548 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-209ENST00000557342 SDSLQ96GA7 329 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 CEP19Q96LK0 163 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 ZNF488Q96MN9 340 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 ANKRD60Q9BZ19 345 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 HES4Q9HCC6 221 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 FKBP14Q9NWM8 211 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 SLC25A10Q9UBX3 287 aaPredicted RBP10.35□□□□□ -0.75
SLIRP-209ENST00000557342 RPUSD1Q9UJJ7 312 aaKnown RBP10.35□□□□□ -0.75
SLIRP-209ENST00000557342 ZNF222Q9UK12 451 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 NUP50Q9UKX7 468 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 RAB26Q9ULW5 256 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 ERGIC3Q9Y282 383 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 ZNF281Q9Y2X9 895 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 LRRC42Q9Y546 428 aa10.35□□□□□ -0.75
SLIRP-209ENST00000557342 A0A1B0GW55 424 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 RFPL4AA6NLU0 287 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 ZNF879B4DU55 563 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 RFPL4AL1F8VTS6 287 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 SLC1A7O00341 560 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 SULT1B1O43704 296 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 PLATP00750 562 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 KNG1P01042 644 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 CDK1P06493 297 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 DUX4L2P0CJ85 424 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 DUX4L3P0CJ86 424 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 DUX4L4P0CJ87 422 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 DUX4L5P0CJ88 424 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 DUX4L6P0CJ89 424 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 DUX4L7P0CJ90 424 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 PRDX2P32119 198 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 WNT4P56705 351 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 ERVK11-1P61568 191 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 DGUOKQ16854 277 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 METTL11BQ5VVY1 283 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 RNLSQ5VYX0 342 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 XAF1Q6GPH4 301 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 DUX4L9Q6RFH8 374 aaPredicted RBP10.34□□□□□ -0.75
SLIRP-209ENST00000557342 FIP1L1Q6UN15 594 aaKnown RBP10.34□□□□□ -0.75
SLIRP-209ENST00000557342 SLC25A26Q70HW3 274 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 BPIFB2Q8N4F0 458 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 OR13C9Q8NGT0 318 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 H1FXQ92522 213 aaKnown RBP10.34□□□□□ -0.75
SLIRP-209ENST00000557342 SLAMF9Q96A28 289 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 SUCNR1Q9BXA5 334 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 CNTD2Q9H8S5 307 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 MTCH1Q9NZJ7 389 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 DUX4Q9UBX2 424 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 TPRKBQ9Y3C4 175 aa10.34□□□□□ -0.75
SLIRP-209ENST00000557342 PTGES3LE9PB15 166 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 MAGEB3O15480 346 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 FCN3O75636 299 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 TOX4O94842 621 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 HCKP08631 526 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 NDUFB7P17568 137 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 RAB3AP20336 220 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 C21orf33P30042 268 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-209ENST00000557342 POU3F4P49335 361 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 CAPZA1P52907 286 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 BPIFB3P59826 476 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 FGF12P61328 243 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 PDZK1IP1Q13113 114 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 YIF1BQ5BJH7 314 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 DMKNQ6E0U4 476 aaPredicted RBP10.33□□□□□ -0.76
SLIRP-209ENST00000557342 USP43Q70EL4 1123 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 CMTM4Q8IZR5 234 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 NANOGP1Q8N7R0 232 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 ZNF485Q8NCK3 441 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 LY6G5BQ8NDX9 201 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 TMEM185AQ8NFB2 350 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 C8orf46Q8TAG6 207 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 TMEM158Q8WZ71 300 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 WDFY2Q96P53 400 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 JMJD8Q96S16 334 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 DCTN5Q9BTE1 182 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 MND1Q9BWT6 205 aa10.33□□□□□ -0.76
SLIRP-209ENST00000557342 Q9H521 79 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms