RNA–Protein interactions for RNA: ENST00000557262.5

TUBB3-213, Transcript of tubulin beta 3 class III, humanhuman

TSL 1 (best)

Gene TUBB3, Length 888 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-213ENST00000557262 ADGRL4Q9HBW9 690 aa12.91□□□□□ -0.34
TUBB3-213ENST00000557262 HES4Q9HCC6 221 aa12.91□□□□□ -0.34
TUBB3-213ENST00000557262 KRT84Q9NSB2 600 aa12.91□□□□□ -0.34
TUBB3-213ENST00000557262 CLN6Q9NWW5 311 aa12.91□□□□□ -0.34
TUBB3-213ENST00000557262 MRM2Q9UI43 246 aaKnown RBP12.91□□□□□ -0.34
TUBB3-213ENST00000557262 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.91□□□□□ -0.34
TUBB3-213ENST00000557262 SIGLEC9Q9Y336 463 aa12.91□□□□□ -0.34
TUBB3-213ENST00000557262 A6NIN4 97 aa12.9□□□□□ -0.34
TUBB3-213ENST00000557262 MITFO75030 526 aaPredicted RBP12.9□□□□□ -0.34
TUBB3-213ENST00000557262 CCL3L1P16619 93 aa12.9□□□□□ -0.34
TUBB3-213ENST00000557262 MPZP25189 248 aa12.9□□□□□ -0.34
TUBB3-213ENST00000557262 EFNB2P52799 333 aa12.9□□□□□ -0.34
TUBB3-213ENST00000557262 ERVFRD-1P60508 538 aa12.9□□□□□ -0.34
TUBB3-213ENST00000557262 ERVK11-1P61568 191 aa12.9□□□□□ -0.34
TUBB3-213ENST00000557262 ANGPTL5Q86XS5 388 aa12.9□□□□□ -0.34
TUBB3-213ENST00000557262 OR2T6Q8NHC8 308 aa12.9□□□□□ -0.34
TUBB3-213ENST00000557262 RANBP3Q9H6Z4 567 aaPredicted RBP12.9□□□□□ -0.34
TUBB3-213ENST00000557262 OR14J1Q9UGF5 321 aa12.9□□□□□ -0.34
TUBB3-213ENST00000557262 A0A0G2JK05 382 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 ZAR1LA6NP61 321 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 G3V2T6 193 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 K7N7A8 449 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 M0R129 80 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 PAX6P26367 422 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 EPHA2P29317 976 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 IL24Q13007 206 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 ZNF273Q14593 569 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 C12orf73Q69YU5 71 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 LIAT1Q6ZQX7 453 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 PLEKHG7Q6ZR37 379 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 PIFOQ8TCI5 191 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 IL4I1Q96RQ9 567 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 PKIBQ9C010 78 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 SLC7A11Q9UPY5 501 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 SLC22A13Q9Y226 551 aa12.89□□□□□ -0.35
TUBB3-213ENST00000557262 FAM90A8PA6NJQ4 464 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 C17orf98A8MV24 154 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 RPP14O95059 124 aaKnown RBP12.88□□□□□ -0.35
TUBB3-213ENST00000557262 KRT8P05787 483 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 CHRM2P08172 466 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 CCL1P22362 96 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 COX7A1P24310 79 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 BMXP51813 675 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 KDM4DQ6B0I6 523 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 C1QL4Q86Z23 238 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 GID4Q8IVV7 300 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 BATF2Q8N1L9 274 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 YIPF7Q8N8F6 280 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 BCAS4Q8TDM0 211 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 CFHR4Q92496 578 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 CADM1Q9BY67 442 aaKnown RBP12.88□□□□□ -0.35
TUBB3-213ENST00000557262 NPFFR1Q9GZQ6 430 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 FOXJ3Q9UPW0 622 aa12.88□□□□□ -0.35
TUBB3-213ENST00000557262 FAM230AA0A1W2PPH8 454 aa12.87□□□□□ -0.35
TUBB3-213ENST00000557262 VGLL3A8MV65 326 aa12.87□□□□□ -0.35
TUBB3-213ENST00000557262 PIPP12273 146 aaPredicted RBP12.87□□□□□ -0.35
TUBB3-213ENST00000557262 DLX6P56179 175 aa12.87□□□□□ -0.35
TUBB3-213ENST00000557262 COL10A1Q03692 680 aa12.87□□□□□ -0.35
TUBB3-213ENST00000557262 ATP6AP1Q15904 470 aa12.87□□□□□ -0.35
TUBB3-213ENST00000557262 ZNF782Q6ZMW2 699 aaPredicted RBP12.87□□□□□ -0.35
TUBB3-213ENST00000557262 LHFPL4Q7Z7J7 247 aa12.87□□□□□ -0.35
TUBB3-213ENST00000557262 CATSPERDQ86XM0 798 aa12.87□□□□□ -0.35
TUBB3-213ENST00000557262 ZDHHC13Q8IUH4 622 aa12.87□□□□□ -0.35
TUBB3-213ENST00000557262 OR13D1Q8NGV5 346 aa12.87□□□□□ -0.35
TUBB3-213ENST00000557262 TRMT10AQ8TBZ6 339 aaKnown RBP12.87□□□□□ -0.35
TUBB3-213ENST00000557262 MALSU1Q96EH3 234 aa12.87□□□□□ -0.35
TUBB3-213ENST00000557262 CDCA4Q9BXL8 241 aa12.87□□□□□ -0.35
TUBB3-213ENST00000557262 MTCH1Q9NZJ7 389 aa12.87□□□□□ -0.35
TUBB3-213ENST00000557262 WARS2Q9UGM6 360 aaKnown RBP12.87□□□□□ -0.35
TUBB3-213ENST00000557262 ENOPH1Q9UHY7 261 aa12.87□□□□□ -0.35
TUBB3-213ENST00000557262 TET2Q6N021 2002 aaPredicted RBP12.87□□□□□ -0.35
TUBB3-213ENST00000557262 MEGF11A6BM72 1044 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 METTL15A6NJ78 407 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 SYT7O43581 403 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 OR2T7P0C7T2 308 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 ZNF728P0DKX0 622 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 FUT6P51993 359 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 UBE2V2Q15819 145 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 ODF4Q2M2E3 257 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 SSX6Q7RTT6 188 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 DYNAPQ8N1N2 210 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 KLHDC1Q8N7A1 406 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 C11orf44Q8N8P7 122 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 ASCC1Q8N9N2 400 aaKnown RBP12.86□□□□□ -0.35
TUBB3-213ENST00000557262 CCDC54Q8NEL0 328 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 CEP19Q96LK0 163 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 TBX5Q99593 518 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 ADI1Q9BV57 179 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 PLEKHA1Q9HB21 404 aa12.86□□□□□ -0.35
TUBB3-213ENST00000557262 TBL2Q9Y4P3 447 aaKnown RBP12.86□□□□□ -0.35
TUBB3-213ENST00000557262 A0A1W2PQL4 384 aaPredicted RBP12.85□□□□□ -0.35
TUBB3-213ENST00000557262 F8VVB4 439 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 F8VWA3 439 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 CHST1O43916 411 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 ZNF737O75373 536 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 SULT1C4O75897 302 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 SERPINA3P01011 423 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 RBP4P02753 201 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 OPN1MWP04001 364 aa12.85□□□□□ -0.35
TUBB3-213ENST00000557262 ARG1P05089 322 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms