RNA–Protein interactions for RNA: ENST00000556096.6

VPS33B-205, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 1,731 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-205ENST00000556096 SNRPGP15A8MWD9 76 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 IGLV1-44P01699 117 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 HPXP02790 462 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 IL32P24001 234 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 RAD52P43351 418 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 UCP2P55851 309 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 MAB21L1Q13394 359 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 ACTBL2Q562R1 376 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 IDO2Q6ZQW0 420 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 SLC36A1Q7Z2H8 476 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 OR5P3Q8WZ94 311 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 SNRNP40Q96DI7 357 aaKnown RBP12.62□□□□□ -0.39
VPS33B-205ENST00000556096 SLC6A7Q99884 636 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 PRRT1Q99946 306 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 SLX1AQ9BQ83 275 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 TRAF4Q9BUZ4 470 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-205ENST00000556096 BEX2Q9BXY8 128 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 BEX1Q9HBH7 125 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 GPN1Q9HCN4 374 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-205ENST00000556096 PLEKHJ1Q9NW61 149 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 OR5H1A6NKK0 313 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 OR5B21A6NL26 309 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 ZNF732B4DXR9 585 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 ZNF35P13682 527 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 RAC2P15153 192 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 GABRR1P24046 479 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 SIGIRRQ6IA17 410 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 ELP2Q6IA86 826 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 OR52W1Q6IF63 320 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 UNQ6126/PRO20091Q6UXV3 157 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 SLC25A26Q70HW3 274 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 HOGA1Q86XE5 327 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 ZNF843Q8N446 348 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 RPRMLQ8N4K4 120 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 BEST4Q8NFU0 473 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 SNAPC3Q92966 411 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 FBXW5Q969U6 566 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 OR51B6Q9H340 312 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 MYOZ1Q9NP98 299 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-205ENST00000556096 ASF1BQ9NVP2 202 aa12.62□□□□□ -0.39
VPS33B-205ENST00000556096 ZNF629Q9UEG4 869 aaPredicted RBP12.62□□□□□ -0.39
VPS33B-205ENST00000556096 PRSS44E7EML9 344 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 PRRG2O14669 202 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 AGFG2O95081 481 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 SFTPBP07988 381 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 SULT1A3P0DMM9 295 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 SULT1A4P0DMN0 295 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 SELEP16581 610 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 ANXA7P20073 488 aaKnown RBP12.61□□□□□ -0.39
VPS33B-205ENST00000556096 GPM6AP51674 278 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 TAF9Q16594 264 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 VAX1Q5SQQ9 334 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 C1QTNF12Q5T7M4 302 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 OR2T2Q6IF00 324 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 ZNF474Q6S9Z5 364 aaPredicted RBP12.61□□□□□ -0.39
VPS33B-205ENST00000556096 MKXQ8IYA7 352 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 OR11H7Q8NGC8 314 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 OR4K15Q8NH41 348 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 DACT3Q96B18 629 aaPredicted RBP12.61□□□□□ -0.39
VPS33B-205ENST00000556096 DMRTB1Q96MA1 342 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 NOP16Q9Y3C1 178 aaKnown RBP12.61□□□□□ -0.39
VPS33B-205ENST00000556096 CFAP46Q8IYW2 2715 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 COL6A6A6NMZ7 2263 aa12.61□□□□□ -0.39
VPS33B-205ENST00000556096 FAM90A10PA6NDY2 464 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 FAM90A18PA6NE21 464 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 FAM90A16PA6NEW6 464 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 FAM90A20PA6NIJ5 464 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 FAM90A8PA6NJQ4 464 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 FAM90A7PA6NKC0 464 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 FAM90A22PA8MWA6 464 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 FAM90A12PA8MX19 464 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 FAM90A5PA8MXJ8 464 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 FAM90A23PA8MXZ1 464 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 RLN1P04808 185 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 FAM90A15PP0C7V4 464 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 FAM90A13PP0C7W8 464 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 FAM90A14PP0C7W9 464 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 FAM90A24PP0C7X0 464 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 VSIG10L2P0DP72 767 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 GLI4P10075 376 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 CHATP28329 748 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 HRH1P35367 487 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 PMELP40967 661 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 HAAOP46952 286 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 RBM11P57052 281 aaKnown RBP12.6□□□□□ -0.39
VPS33B-205ENST00000556096 GNG3P63215 75 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 SPATA46Q5T0L3 261 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 ZNF626Q68DY1 528 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 C6orf201Q7Z4U5 140 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 NOXA1Q86UR1 476 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 DOLPP1Q86YN1 238 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 LIX1LQ8IVB5 337 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 C1orf174Q8IYL3 243 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 FBXL14Q8N1E6 418 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 BHLHE23Q8NDY6 225 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 OR1J1Q8NGS3 322 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 OR13C8Q8NGS7 320 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 SLC25A40Q8TBP6 338 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 OR2J1Q9GZK6 312 aa12.6□□□□□ -0.39
VPS33B-205ENST00000556096 POU2F3Q9UKI9 436 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms