RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 CPNE2Q96FN4 548 aaPredicted RBP5.89□□□□□ -1.47
SLIRP-204ENST00000555890 REEP6Q96HR9 211 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 SNX22Q96L94 193 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 NEDD4LQ96PU5 975 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 TRIB1Q96RU8 372 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 GPER1Q99527 375 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 DPAGT1Q9H3H5 408 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 TAS2R8Q9NYW2 309 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 NPAP1Q9NZP6 1156 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 COPZ2Q9P299 210 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 PIGLQ9Y2B2 252 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 MED12LQ86YW9 2145 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 FREM1Q5H8C1 2179 aa5.89□□□□□ -1.47
SLIRP-204ENST00000555890 GGT3PA6NGU5 568 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 SULT1C2O00338 296 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 LANCL1O43813 399 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 ORC5O43913 435 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 SSX4O60224 188 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 DHFRP00374 187 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 AMY1AP04745 511 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 SERPINA5P05154 406 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 CD79AP11912 226 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 PRKACBP22694 351 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 PRSS3P35030 304 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 FAUP35544 74 aaKnown RBP5.88□□□□□ -1.47
SLIRP-204ENST00000555890 RPS16P62249 146 aaKnown RBP5.88□□□□□ -1.47
SLIRP-204ENST00000555890 BTG1P62324 171 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 SSBP1Q04837 148 aaKnown RBP5.88□□□□□ -1.47
SLIRP-204ENST00000555890 RNASE12Q5GAN4 147 aaKnown RBP5.88□□□□□ -1.47
SLIRP-204ENST00000555890 C9orf135Q5VTT2 229 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 AGAP6Q5VW22 663 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 PLXDC2Q6UX71 529 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 Q6ZS92 163 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 C1orf122Q6ZSJ8 110 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 OR2W3Q7Z3T1 314 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 AKAP14Q86UN6 197 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 FJX1Q86VR8 437 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 ANGPTL5Q86XS5 388 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 LYPD6Q86Y78 171 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 CCDC36Q8IYA8 594 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 ZNF101Q8IZC7 436 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 OR5AS1Q8N127 324 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 OR4D6Q8NGJ1 314 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 OR1K1Q8NGR3 316 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 OR52I2Q8NH67 350 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 KCNG3Q8TAE7 436 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 DEDD2Q8WXF8 326 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 CREB3L1Q96BA8 519 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 LYZL4Q96KX0 146 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 S100A13Q99584 98 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 MMP28Q9H239 520 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 SCPEP1Q9HB40 452 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 C19orf73Q9NVV2 129 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 GAR1Q9NY12 217 aaKnown RBP5.88□□□□□ -1.47
SLIRP-204ENST00000555890 ETAA1Q9NY74 926 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 CLCF1Q9UBD9 225 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 NLKQ9UBE8 527 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 GHRLQ9UBU3 117 aa5.88□□□□□ -1.47
SLIRP-204ENST00000555890 MRPS28Q9Y2Q9 187 aaKnown RBP5.88□□□□□ -1.47
SLIRP-204ENST00000555890 CIB4A0PJX0 185 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 MEIOCA2RUB1 952 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 E9PLN8 166 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 INMT-MINDY4F8WBC2 141 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 F2RL2O00254 374 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 LDLRAD4O15165 306 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 IL18BPO95998 194 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 HLA-HP01893 362 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 CHRM2P08172 466 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 CSF1P09603 554 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 TMIGD3P0DMS9 266 aaPredicted RBP5.87□□□□□ -1.47
SLIRP-204ENST00000555890 DNASE1P24855 282 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 STOMP27105 288 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 HLA-DMAP28067 261 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 SLC6A1P30531 599 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 APLNRP35414 380 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 EFNB2P52799 333 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 UBE2NP61088 152 aaKnown RBP5.87□□□□□ -1.47
SLIRP-204ENST00000555890 PMPCAQ10713 525 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 KLF9Q13886 244 aaPredicted RBP5.87□□□□□ -1.47
SLIRP-204ENST00000555890 GSG1Q2KHT4 349 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 SNAI3Q3KNW1 292 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 KRTCAP3Q53RY4 240 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 AWAT2Q6E213 333 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 ZNF585AQ6P3V2 769 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 GLIPR1L1Q6UWM5 242 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 MRGPRGQ86SM5 289 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 WFDC3Q8IUB2 231 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 BCL6BQ8N143 479 aaPredicted RBP5.87□□□□□ -1.47
SLIRP-204ENST00000555890 ZNF808Q8N4W9 903 aaPredicted RBP5.87□□□□□ -1.47
SLIRP-204ENST00000555890 FGFBP3Q8TAT2 258 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 BCL2L2Q92843 193 aaPredicted RBP5.87□□□□□ -1.47
SLIRP-204ENST00000555890 APOBEC3DQ96AK3 386 aaPredicted RBP5.87□□□□□ -1.47
SLIRP-204ENST00000555890 SPSB1Q96BD6 273 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 TECTBQ96PL2 329 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 NEURL2Q9BR09 285 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 NUDT16L1Q9BRJ7 211 aaKnown RBP5.87□□□□□ -1.47
SLIRP-204ENST00000555890 MARVELD1Q9BSK0 173 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 URM1Q9BTM9 101 aaKnown RBP5.87□□□□□ -1.47
SLIRP-204ENST00000555890 C1QTNF5Q9BXJ0 243 aa5.87□□□□□ -1.47
SLIRP-204ENST00000555890 CACNG6Q9BXT2 260 aa5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms