RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 RBM39Q14498 530 aaKnown RBP6.11□□□□□ -1.43
TDP1-213ENST00000555880 GUCA2BQ16661 112 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 SWI5Q1ZZU3 235 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 HLA-BQ31612 363 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 C10orf91Q5T1B1 145 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 RPUSD3Q6P087 351 aaKnown RBP6.11□□□□□ -1.43
TDP1-213ENST00000555880 TMEM88Q6PEY1 159 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 LHFPL2Q6ZUX7 228 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 RAB11FIP2Q7L804 512 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 WDR5BQ86VZ2 330 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 RPS19BP1Q86WX3 136 aaKnown RBP6.11□□□□□ -1.43
TDP1-213ENST00000555880 LDLRAD3Q86YD5 345 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 GPR137CQ8N3F9 429 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 AGBL5Q8NDL9 886 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 BHLHE23Q8NDY6 225 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 IFI44Q8TCB0 444 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 SGK3Q96BR1 496 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 FBXO17Q96EF6 278 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 BORCS8Q96FH0 119 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 SMIM8Q96KF7 97 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 IMMP1LQ96LU5 166 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 CMSS1Q9BQ75 279 aaKnown RBP6.11□□□□□ -1.43
TDP1-213ENST00000555880 PLEKHA2Q9HB19 425 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 RHOFQ9HBH0 211 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 ZFP57Q9NU63 452 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 FOXD3Q9UJU5 478 aaPredicted RBP6.11□□□□□ -1.43
TDP1-213ENST00000555880 MCTS1Q9ULC4 181 aaKnown RBP6.11□□□□□ -1.43
TDP1-213ENST00000555880 HSF4Q9ULV5 492 aa6.11□□□□□ -1.43
TDP1-213ENST00000555880 ARID1AO14497 2285 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 ZIC3O60481 467 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 DEDDO75618 318 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 FARS2O95363 451 aaKnown RBP6.1□□□□□ -1.43
TDP1-213ENST00000555880 SCGB1D2O95969 90 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 LCATP04180 440 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 CD63P08962 238 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 HKR1P10072 659 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 ICAM2P13598 275 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 ZNF708P17019 499 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 ADCYAP1P18509 176 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 FCGR2CP31995 323 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 FOLR3P41439 243 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 F2RL1P55085 397 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 PCBD1P61457 104 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 ZXDAP98168 799 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 IL15RAQ13261 267 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 RSPO1Q2MKA7 263 aaPredicted RBP6.1□□□□□ -1.43
TDP1-213ENST00000555880 SNAI3Q3KNW1 292 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 FAM76BQ5HYJ3 339 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 RPL7L1Q6DKI1 246 aaKnown RBP6.1□□□□□ -1.43
TDP1-213ENST00000555880 CRIP3Q6Q6R5 217 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 ESX1Q8N693 406 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 OR4A4PQ8NGN8 299 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 OR10Z1Q8NGY1 313 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 OR1F12Q8NHA8 337 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 KCNE4Q8WWG9 221 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 TOMM40LQ969M1 308 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 ZC3H10Q96K80 434 aaKnown RBP6.1□□□□□ -1.43
TDP1-213ENST00000555880 PRRX2Q99811 253 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 FAAP24Q9BTP7 215 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 TLNRD1Q9H1K6 362 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 RGCCQ9H4X1 137 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 TMEM231Q9H6L2 316 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 AKIRIN1Q9H9L7 192 aaPredicted RBP6.1□□□□□ -1.43
TDP1-213ENST00000555880 PARP11Q9NR21 331 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 TUBD1Q9UJT1 453 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 SLC7A11Q9UPY5 501 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 LSM5Q9Y4Y9 91 aaKnown RBP6.1□□□□□ -1.43
TDP1-213ENST00000555880 POMT1Q9Y6A1 747 aa6.1□□□□□ -1.43
TDP1-213ENST00000555880 RTTNQ86VV8 2226 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 VCANP13611 3396 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 BORCS7-ASMTA0A0B4J1R7 106 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 A0A0J9YW62 118 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 PMS2P1A4D2B8 440 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 E5RGE8 158 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 SPRY1O43609 319 aaPredicted RBP6.09□□□□□ -1.43
TDP1-213ENST00000555880 ANGPTL7O43827 346 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 NRASP01111 189 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 P04436 131 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 CFIP05156 583 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 UMODP07911 640 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 SFTA3P0C7M3 94 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 NME2P22392 152 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 CRYGSP22914 178 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 GLP1RP43220 463 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 HTR5AP47898 357 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 SULT1A2P50226 295 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 DUSP3P51452 185 aaPredicted RBP6.09□□□□□ -1.43
TDP1-213ENST00000555880 PIGPP57054 158 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 CARD18P57730 90 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 RAC3P60763 192 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 TRA2AQ13595 282 aaKnown RBP eCLIP6.09□□□□□ -1.43
TDP1-213ENST00000555880 TAF9Q16594 264 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 GGNBP1Q5YKI7 109 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 PMS2CLQ68D20 193 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 DHRS7BQ6IAN0 325 aaPredicted RBP6.09□□□□□ -1.43
TDP1-213ENST00000555880 ZNF774Q6NX45 483 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 CBLN2Q8IUK8 224 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 ZIC4Q8N9L1 334 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 OR2Y1Q8NGV0 311 aa6.09□□□□□ -1.43
TDP1-213ENST00000555880 OR2AE1Q8NHA4 323 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms