RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 ARHGAP5-AS1Q96IT6 56 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 C20orf24Q9BUV8 137 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 HIPK2Q9H2X6 1198 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 KLRF1Q9NZS2 232 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 RARRES3Q9UL19 164 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 ALPK2Q86TB3 2170 aa9.38□□□□□ -0.91
MTHFD1-210ENST00000555252 PCDH15Q96QU1 1955 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 TMEM265A0A087WTH1 108 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 MASP2O00187 686 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 SLC31A2O15432 143 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 SCRG1O75711 98 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 RAD51DO75771 328 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 YIF1AO95070 293 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 PTBP3O95758 552 aaKnown RBP9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 PRH1P02810 166 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 PAX1P15863 534 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 PI3P19957 117 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 OTPQ5XKR4 325 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 CPEB2Q7Z5Q1 589 aaKnown RBP9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 TMEM104Q8NE00 496 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 OR5R1Q8NH85 324 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 M1APQ8TC57 530 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 CLDN23Q96B33 292 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 TM2D1Q9BX74 207 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 CENPMQ9NSP4 180 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 PRR13Q9NZ81 148 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 KCNIP3Q9Y2W7 256 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 EXPH5Q8NEV8 1989 aa9.37□□□□□ -0.91
MTHFD1-210ENST00000555252 ADAMTS20P59510 1910 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 LOC101059948A0A1B0GTJ6 334 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 PPP1R2P9O14990 202 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 CEACAM6P40199 344 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 CXCL12P48061 93 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 NDUFA6P56556 154 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 FMODQ06828 376 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 SHBQ15464 509 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 SLC22A25Q6T423 547 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 C16orf47Q6ZP98 133 aaPredicted RBP9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 LINC00346Q8IVM7 164 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 FOXRED2Q8IWF2 684 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 HPSE2Q8WWQ2 592 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 C11orf40Q8WZ69 217 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 ERGIC1Q969X5 290 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 OR6C1Q96RD1 312 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 SUCNR1Q9BXA5 334 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 KIAA1456Q9P272 454 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 VDAC3Q9Y277 283 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 LSM5Q9Y4Y9 91 aaKnown RBP9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 ZNF878C9JN71 531 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 MYF5P13349 255 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 BIDP55957 195 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 ZNF266Q14584 549 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 ELOBQ15370 118 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 UBE2V2Q15819 145 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 PLPPR5Q32ZL2 321 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 DOK3Q7L591 496 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 UEVLDQ8IX04 471 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 C2orf88Q9BSF0 95 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 MRPL13Q9BYD1 178 aaKnown RBP9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 SMIM3Q9BZL3 60 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 METTL7AQ9H8H3 244 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 MED29Q9NX70 200 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 FBXO7Q9Y3I1 522 aa9.36□□□□□ -0.91
MTHFD1-210ENST00000555252 C2orf72A6NCS6 295 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 RBFOX3A6NFN3 312 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 ZNF724A8MTY0 619 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 MKRN2OSH3BPM6 223 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 H7C1Q1 480 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 CRTAPO75718 401 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 KNG1P01042 644 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 IGHG1P01857 330 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 HSPB1P04792 205 aaKnown RBP9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 EPHA8P29322 1005 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 DDTP30046 118 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 OR3A4PP47883 348 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 DHPSP49366 369 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 ZNF133P52736 654 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 CLRN1P58418 232 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 NKX6-1P78426 367 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 ZNF124Q15973 351 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 BEND4Q6ZU67 534 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 SLC35E3Q7Z769 313 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 PPP1R3BQ86XI6 285 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 HIST3H2BBQ8N257 126 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 TMEM156Q8N614 296 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 CCDC54Q8NEL0 328 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 OR10G4Q8NGN3 311 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 AKR7LQ8NHP1 331 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 THAP3Q8WTV1 239 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 ST6GALNAC5Q9BVH7 336 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 PECRQ9BY49 303 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 NELFAQ9H3P2 528 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 TMEM242Q9NWH2 141 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 MYOTQ9UBF9 498 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 ATXN7L1Q9ULK2 861 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 B3GALT1Q9Y5Z6 326 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 OR5H15A6NDH6 313 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 OR5H1A6NKK0 313 aa9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 MBPP02686 304 aaPredicted RBP9.35□□□□□ -0.91
MTHFD1-210ENST00000555252 HCKP08631 526 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms