RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PRMT9Q6P2P2 845 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 TMEM205Q6UW68 189 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 ACP7Q6ZNF0 438 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 LRRC74BQ6ZQY2 392 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 UBE2J2Q8N2K1 259 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 TPRX1Q8N7U7 411 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 OR10G9Q8NGN4 311 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 OR2A1Q8NGT9 310 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 OR6X1Q8NH79 312 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 FNDC9Q8TBE3 224 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 MCOLN3Q8TDD5 553 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF418Q8TF45 676 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 S100PBPQ96BU1 408 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF799Q96GE5 643 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 PLEKHA8Q96JA3 519 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 RILPQ96NA2 401 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 TSNARE1Q96NA8 513 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 MS4A4EQ96PG1 132 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 OR2M2Q96R28 347 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 UGT2B28Q9BY64 529 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 MFFQ9GZY8 342 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 CDC42EP4Q9H3Q1 356 aaKnown RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 TPK1Q9H3S4 243 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 TMEM185BQ9H7F4 350 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 ANKHQ9HCJ1 492 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 CCL28Q9NRJ3 127 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 ZNHIT6Q9NWK9 470 aaKnown RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 CALYQ9NYX4 217 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 CLCF1Q9UBD9 225 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 NUFIP1Q9UHK0 495 aaKnown RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 PRO0461Q9UI25 63 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 PEX16Q9Y5Y5 336 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 SOX21Q9Y651 276 aaPredicted RBP1□□□□□ -2.25
PRPF39-208ENST00000554785 IKBKGQ9Y6K9 419 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 TANC2Q9HCD6 1990 aa1□□□□□ -2.25
PRPF39-208ENST00000554785 MUC19Q7Z5P9 8384 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 IGLV3-12A0A075B6K2 115 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 PPIAL4EA0A075B759 164 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 KIR2DL5BA0A0G2JN68 375 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 KIR2DL5BA0A0G2JPC4 375 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 A0A1W2PPE3 182 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 A0A1W2PPV9 198 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 A6NDX4 124 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 C4orf51C9J302 202 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 H0Y8G0 127 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 MGRN1O60291 552 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 CA11O75493 328 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 YEATS4O95619 227 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 EPPINO95925 133 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 MOSP00540 346 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 SERPINA3P01011 423 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 CD8AP01732 235 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 GAPDHP04406 335 aaKnown RBP0.99□□□□□ -2.25
PRPF39-208ENST00000554785 SLC35G6P0C7Q6 338 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 PPIAL4FP0DN26 164 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 TCN1P20061 433 aaPredicted RBP0.99□□□□□ -2.25
PRPF39-208ENST00000554785 MSNP26038 577 aaKnown RBP0.99□□□□□ -2.25
PRPF39-208ENST00000554785 CMPK1P30085 196 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 CCR7P32248 378 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 RPA3P35244 121 aaPredicted RBP0.99□□□□□ -2.25
PRPF39-208ENST00000554785 TAGLN2P37802 199 aaKnown RBP0.99□□□□□ -2.25
PRPF39-208ENST00000554785 HSPA9P38646 679 aaKnown RBP0.99□□□□□ -2.25
PRPF39-208ENST00000554785 CD79BP40259 229 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 VHLP40337 213 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 PEX19P40855 299 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 RPS10P46783 165 aaKnown RBP0.99□□□□□ -2.25
PRPF39-208ENST00000554785 ACTR3P61158 418 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 TBPL1P62380 186 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 CRADDP78560 199 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 ACVR1Q04771 509 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 BST1Q10588 318 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 CDH17Q12864 832 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 GK3PQ14409 553 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 KIAA0087Q14695 138 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 ALKBH6Q3KRA9 238 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 ZNF658BQ4V348 819 aaPredicted RBP0.99□□□□□ -2.25
PRPF39-208ENST00000554785 LRRC10Q5BKY1 277 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 FBXO48Q5FWF7 155 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 BEX5Q5H9J7 111 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 PRAMEF5Q5TYX0 476 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 PRAMEF6Q5VXH4 476 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 RAET1LQ5VY80 246 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 ADNP2Q6IQ32 1131 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 H3F3CQ6NXT2 135 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 SBSNQ6UWP8 590 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 Q6ZVH6 145 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 PID1Q7Z2X4 250 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 VN1R4Q7Z5H5 301 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 GALNT10Q86SR1 603 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 EGFL6Q8IUX8 553 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 FAM71AQ8IYT1 594 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 KIR2DL5AQ8N109 375 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 MUC15Q8N387 334 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 Q8N9W7 124 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 SDR9C7Q8NEX9 313 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 B3GNT7Q8NFL0 401 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 OR4F6Q8NGB9 312 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 OR1L6Q8NGR2 347 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 OR1N2Q8NGR9 330 aa0.99□□□□□ -2.25
PRPF39-208ENST00000554785 KIR2DL5BQ8NHK3 375 aa0.99□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms