RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 C3orf85A0A1B0GTC6 90 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 ADAM20O43506 726 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 HPP00738 406 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 SMIM17P0DL12 118 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 S100A4P26447 101 aaKnown RBP12.43□□□□□ -0.42
VTI1B-204ENST00000554659 SURF2Q15527 256 aaPredicted RBP12.43□□□□□ -0.42
VTI1B-204ENST00000554659 CEBPEQ15744 281 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 STPG2Q8N412 459 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 OR10AD1Q8NGE0 317 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 ZNF707Q96C28 371 aaPredicted RBP12.43□□□□□ -0.42
VTI1B-204ENST00000554659 DNAJC13O75165 2243 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 SHISA8B8ZZ34 492 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 CST2P09228 141 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 ZNF154Q13106 437 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 IGSF11Q5DX21 431 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 GPBAR1Q8TDU6 330 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 MCHR2Q969V1 340 aa12.43□□□□□ -0.42
VTI1B-204ENST00000554659 NAT1P18440 290 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 OR3A4PP47883 348 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 OR5C1Q8NGR4 320 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 OR2T6Q8NHC8 308 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 ZNF107Q9UII5 783 aaPredicted RBP12.42□□□□□ -0.42
VTI1B-204ENST00000554659 OR5AL1P0C617 328 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 GABRA1P14867 456 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 CTLA4P16410 223 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 CLPPQ16740 277 aaPredicted RBP12.42□□□□□ -0.42
VTI1B-204ENST00000554659 IL22RA2Q969J5 263 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 FAM210BQ96KR6 192 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 FBXL17Q9UF56 701 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 MTCH2Q9Y6C9 303 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 KRASP01116 189 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 MEOX2P50222 304 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 INPP5JQ15735 1006 aaPredicted RBP12.42□□□□□ -0.42
VTI1B-204ENST00000554659 OR2C3Q8N628 320 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 BVESQ8NE79 360 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 OR4D11Q8NGI4 311 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 PAPPAQ13219 1627 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 SDHBP21912 280 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 TMEM241Q24JQ0 296 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 C6orf201Q7Z4U5 140 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 CARFQ8N187 725 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 POM121L2Q96KW2 1035 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 MOGAT1Q96PD6 335 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 FAAP24Q9BTP7 215 aa12.42□□□□□ -0.42
VTI1B-204ENST00000554659 M0R1B8 84 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 PLA2G10O15496 165 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 PDCD6O75340 191 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 CT62P0C5K7 136 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 HOXB3P14651 431 aaPredicted RBP12.41□□□□□ -0.42
VTI1B-204ENST00000554659 TRILQ7L0X0 811 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 ATP23Q9Y6H3 246 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 ST8SIA5O15466 376 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 MDH2P40926 338 aaKnown RBP12.41□□□□□ -0.42
VTI1B-204ENST00000554659 TIPARPQ7Z3E1 657 aaKnown RBP12.41□□□□□ -0.42
VTI1B-204ENST00000554659 BCL2L2Q92843 193 aaPredicted RBP12.41□□□□□ -0.42
VTI1B-204ENST00000554659 LINC00052Q96N35 136 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 MED19A0JLT2 244 aaPredicted RBP12.41□□□□□ -0.42
VTI1B-204ENST00000554659 FCN1O00602 326 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 PRRG2O14669 202 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 GZMMP51124 257 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 CCL7P80098 99 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 SLC38A11Q08AI6 406 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 ZNF770Q6IQ21 691 aaPredicted RBP12.41□□□□□ -0.42
VTI1B-204ENST00000554659 HES4Q9HCC6 221 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 NEU3Q9UQ49 428 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 LINC00862A6NCI5 91 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 CTSDP07339 412 aaPredicted RBP12.41□□□□□ -0.42
VTI1B-204ENST00000554659 TMEM267Q0VDI3 215 aaPredicted RBP12.41□□□□□ -0.42
VTI1B-204ENST00000554659 IGFBP7Q16270 282 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 MSL2Q9HCI7 577 aa12.41□□□□□ -0.42
VTI1B-204ENST00000554659 DOCK1Q14185 1865 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 CXCL3P19876 107 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 RAB7AP51149 207 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 RPL24P83731 157 aaKnown RBP12.4□□□□□ -0.42
VTI1B-204ENST00000554659 ISXQ2M1V0 245 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 LSMEM1Q8N8F7 131 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 OR4D10Q8NGI6 311 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 OR1L3Q8NH93 324 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 DYRK2Q92630 601 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 TRGV10A0A0A0MS01 117 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 MAP1LC3B2A6NCE7 125 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 HEXAP06865 529 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 CHRNA7P36544 502 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 ZNF79Q15937 498 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 RSRP1Q9BUV0 290 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 FOXQ1Q9C009 403 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 MAP1LC3BQ9GZQ8 125 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.4□□□□□ -0.42
VTI1B-204ENST00000554659 BET1LQ9NYM9 111 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 TAAR3PQ9P1P4 343 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 ADAMTS7Q9UKP4 1686 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 CD200P41217 278 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 FFAR4Q5NUL3 377 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 RGS7BPQ6MZT1 257 aaPredicted RBP12.4□□□□□ -0.42
VTI1B-204ENST00000554659 ANKRD37Q7Z713 158 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 RPS4Y2Q8TD47 263 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 MOB3AQ96BX8 217 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 A0A1B0GTQ1 180 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 LINC01565O15544 149 aa12.4□□□□□ -0.42
VTI1B-204ENST00000554659 WISP3O95389 354 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms