RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 IGHV1-8P0DP01 117 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 TROVE2P10155 538 aaKnown RBP eCLIP5.36□□□□□ -1.55
ATXN3-224ENST00000554040 SLC2A1P11166 492 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 BRS3P32247 399 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 DCTDP32321 178 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 YAP1P46937 504 aaKnown RBP5.36□□□□□ -1.55
ATXN3-224ENST00000554040 INSL3P51460 131 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 RPS6KA3P51812 740 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 PRKXP51817 358 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 IL18R1Q13478 541 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 KIR2DS1Q14954 304 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 KRT72Q14CN4 511 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 C9orf152Q5JTZ5 239 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 EPGNQ6UW88 154 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 ZNF730Q6ZMV8 503 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 KCTD8Q6ZWB6 473 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 MBOAT2Q6ZWT7 520 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 ZBTB46Q86UZ6 589 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 THNSL2Q86YJ6 484 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 ZNF561Q8N587 486 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 COMMD1Q8N668 190 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 CSNK2A3Q8NEV1 391 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 OR4C15Q8NGM1 316 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 OR8U1Q8NH10 309 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 NDNFQ8TB73 568 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 OR5P3Q8WZ94 311 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 LZICQ8WZA0 190 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 CDRT15Q96T59 188 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 COPS4Q9BT78 406 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 FNDC11Q9BVV2 318 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 RTL8AQ9BWD3 113 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 NSRP1Q9H0G5 558 aaKnown RBP5.36□□□□□ -1.55
ATXN3-224ENST00000554040 C1orf21Q9H246 121 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 DCLRE1BQ9H816 532 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 TBC1D23Q9NUY8 699 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 MRPL22Q9NWU5 206 aaKnown RBP5.36□□□□□ -1.55
ATXN3-224ENST00000554040 RHCGQ9UBD6 479 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 KCNG2Q9UJ96 466 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 SIGLEC7Q9Y286 467 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 MPC1Q9Y5U8 109 aa5.36□□□□□ -1.55
ATXN3-224ENST00000554040 DYNC1H1Q14204 4646 aaKnown RBP5.36□□□□□ -1.55
ATXN3-224ENST00000554040 TNCP24821 2201 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 hCG_38984A0A1B0GV85 526 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 FFAR1O14842 300 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 SLC22A2O15244 555 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 HCKP08631 526 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 ZNF728P0DKX0 622 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 GYPEP15421 78 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 ZNF823P16415 610 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 HTR1DP28221 377 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 PRDX2P32119 198 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 SLC18A1P54219 525 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 TAF13Q15543 124 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 SNCBQ16143 134 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 TIGD6Q17RP2 521 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 KLHL12Q53G59 568 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 AGKQ53H12 422 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 FAM27D1Q5T7N8 215 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 FKBP9P1Q75LS8 142 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 LYSMD2Q8IV50 215 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 ZDHHC21Q8IVQ6 265 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 OFCC1Q8IZS5 231 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 FTMTQ8N4E7 242 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 CD177Q8N6Q3 437 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 OR4Q3Q8NH05 313 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 ZNF671Q8TAW3 534 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP5.35□□□□□ -1.55
ATXN3-224ENST00000554040 RNFT2Q96EX2 444 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 REEP6Q96HR9 211 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 RNF170Q96K19 258 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 NOL4LQ96MY1 436 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-224ENST00000554040 NMNAT3Q96T66 252 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 TMEM109Q9BVC6 243 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 FGF23Q9GZV9 251 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-224ENST00000554040 ABCB9Q9NP78 766 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 RASL12Q9NYN1 266 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 HHLA2Q9UM44 414 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 SIRT4Q9Y6E7 314 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-224ENST00000554040 DNAH11Q96DT5 4516 aa5.35□□□□□ -1.55
ATXN3-224ENST00000554040 IGHV2-26A0A0B4J1V2 119 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 ZNF850A8MQ14 1090 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 J3KTA2 159 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 SLC1A7O00341 560 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 RENP00797 406 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 CST4P01036 141 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 TK1P04183 234 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 PIPP12273 146 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-224ENST00000554040 HIST1H1CP16403 213 aaKnown RBP5.34□□□□□ -1.55
ATXN3-224ENST00000554040 CFL1P23528 166 aaKnown RBP5.34□□□□□ -1.55
ATXN3-224ENST00000554040 RPS27P42677 84 aaKnown RBP5.34□□□□□ -1.55
ATXN3-224ENST00000554040 FXYD6P3P58550 94 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 ACTA2P62736 377 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 ACTG2P63267 376 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 ACTC1P68032 377 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 ACTA1P68133 377 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 SLC35B1P78383 322 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 PRDX4Q13162 271 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 DEFB136Q30KP8 78 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 CYBRD1Q53TN4 286 aa5.34□□□□□ -1.55
ATXN3-224ENST00000554040 TEX38Q6PEX7 206 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms