RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 F5H0A9 414 aaPredicted RBP7.4□□□□□ -1.22
TDP1-208ENST00000553989 TMEM178BH3BS89 294 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 J3QW42 95 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 CDC42EP2O14613 210 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 IMPA2O14732 288 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 ARPC3O15145 178 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 CTDSPLO15194 276 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 ST8SIA5O15466 376 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 SULT1B1O43704 296 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 ALX3O95076 343 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 NDUFB2O95178 105 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 CYB5R3P00387 301 aaPredicted RBP7.4□□□□□ -1.22
TDP1-208ENST00000553989 LALBAP00709 142 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 KNG1P01042 644 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 CRYBA1P05813 215 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 COX5BP10606 129 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 ELK1P19419 428 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 KITLGP21583 273 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 MDKP21741 143 aaPredicted RBP7.4□□□□□ -1.22
TDP1-208ENST00000553989 TUBG1P23258 451 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 NOS3P29474 1203 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 SLC6A1P30531 599 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 CENPAP49450 140 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 SRP9P49458 86 aaKnown RBP7.4□□□□□ -1.22
TDP1-208ENST00000553989 RRAS2P62070 204 aaPredicted RBP7.4□□□□□ -1.22
TDP1-208ENST00000553989 RPS7P62081 194 aaKnown RBP7.4□□□□□ -1.22
TDP1-208ENST00000553989 TATDN3Q17R31 274 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 ACSM3Q53FZ2 586 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 KLHL12Q53G59 568 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 UNQ9370/PRO34162Q6UXP9 181 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 DPY19L2P2Q6ZN68 376 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 FOXL2NBQ6ZUU3 175 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 OR8B3Q8NGG8 313 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 OR13C2Q8NGS9 318 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 OR8B2Q96RD0 313 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 WACQ9BTA9 647 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 DPAGT1Q9H3H5 408 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 GCM1Q9NP62 436 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 TUBG2Q9NRH3 451 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 EXTL2Q9UBQ6 330 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 POLR3KQ9Y2Y1 108 aaPredicted RBP7.4□□□□□ -1.22
TDP1-208ENST00000553989 STARD10Q9Y365 291 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 NUBP2Q9Y5Y2 271 aa7.4□□□□□ -1.22
TDP1-208ENST00000553989 IGHV2-70DA0A0C4DH43 119 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 NAP1L6A6NFF2 107 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 ZNF879B4DU55 563 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 CLDN34H7C241 214 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 J3QLW9 94 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 IFNL4K9M1U5 179 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 HOXA3O43365 443 aaPredicted RBP7.39□□□□□ -1.23
TDP1-208ENST00000553989 GSTZ1O43708 216 aaPredicted RBP7.39□□□□□ -1.23
TDP1-208ENST00000553989 SC5DO75845 299 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 APOL3O95236 402 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 IRF2P14316 349 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 RAC2P15153 192 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 ZNF19P17023 458 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 RAB3BP20337 219 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 SLC2A5P22732 501 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 CD80P33681 288 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 TGM4P49221 684 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 NKX2-5P52952 324 aaPredicted RBP7.39□□□□□ -1.23
TDP1-208ENST00000553989 PAX8Q06710 450 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 DYRK1AQ13627 763 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 HLXQ14774 488 aaPredicted RBP7.39□□□□□ -1.23
TDP1-208ENST00000553989 ZNF362Q5T0B9 420 aaPredicted RBP7.39□□□□□ -1.23
TDP1-208ENST00000553989 OTPQ5XKR4 325 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 THOC7Q6I9Y2 204 aaKnown RBP7.39□□□□□ -1.23
TDP1-208ENST00000553989 OR2T2Q6IF00 324 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 SHFQ7M4L6 423 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.39□□□□□ -1.23
TDP1-208ENST00000553989 MOGAT3Q86VF5 341 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 C1orf87Q8N0U7 546 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 YIPF7Q8N8F6 280 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 ZFP41Q8N8Y5 198 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 LRRC75AQ8NAA5 344 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 BHLHE23Q8NDY6 225 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 BBS1Q8NFJ9 593 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 OR5L1Q8NGL2 311 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 OR1F12Q8NHA8 337 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 RAB40AQ8WXH6 277 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 THRSPQ92748 146 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 HAVCR1Q96D42 359 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 NEIL1Q96FI4 390 aaPredicted RBP7.39□□□□□ -1.23
TDP1-208ENST00000553989 RNF170Q96K19 258 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 MEGF10Q96KG7 1140 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 MNTQ99583 582 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 SLITRK2Q9H156 845 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 MED28Q9H204 178 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 OR51V1Q9H2C8 321 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 ISG20L2Q9H9L3 353 aaKnown RBP7.39□□□□□ -1.23
TDP1-208ENST00000553989 RANGRFQ9HD47 186 aaPredicted RBP7.39□□□□□ -1.23
TDP1-208ENST00000553989 ACOXLQ9NUZ1 547 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 NLKQ9UBE8 527 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 ASH2LQ9UBL3 628 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 CLN8Q9UBY8 286 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 MIOXQ9UGB7 285 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 RBMX2Q9Y388 322 aaKnown RBP7.39□□□□□ -1.23
TDP1-208ENST00000553989 ADAM18Q9Y3Q7 739 aa7.39□□□□□ -1.23
TDP1-208ENST00000553989 SOX21Q9Y651 276 aaPredicted RBP7.39□□□□□ -1.23
TDP1-208ENST00000553989 ALG5Q9Y673 324 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms