RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 HIST1H2ABP04908 130 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 FBP1P09467 338 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 HIST1H1CP16403 213 aaKnown RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 CPT2P23786 658 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 CD24P25063 80 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 ACKR3P25106 362 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 PYCR1P32322 319 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 KDELR2P33947 212 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 MDH1P40925 334 aaKnown RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 AMTP48728 403 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 NPY4RP50391 375 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 UBE2E1P51965 193 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 MAGOHP61326 146 aaKnown RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 PCBD1P61457 104 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 FAM3AP98173 230 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 IFFO1Q0D2I5 559 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 SCRN3Q0VDG4 424 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 TRAP1Q12931 704 aaKnown RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 KRR1Q13601 381 aaKnown RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 OR8G1Q15617 311 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 OR8B8Q15620 311 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 CYP51A1Q16850 503 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 RFX4Q33E94 735 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 ZBED5Q49AG3 693 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 CYBRD1Q53TN4 286 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 TTMPQ5BVD1 217 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 ATPAF1Q5TC12 328 aaPredicted RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 TMEM88Q6PEY1 159 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 ADAMTSL5Q6ZMM2 481 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 TMPRSS11FQ6ZWK6 438 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 HIST3H2AQ7L7L0 130 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 ZER1Q7Z7L7 766 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 NDUFA11Q86Y39 141 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 OFCC1Q8IZS5 231 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 CD177Q8N6Q3 437 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 NEXN-AS1Q8NBZ9 246 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 ZNRF1Q8ND25 227 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 PAPD5Q8NDF8 572 aaKnown RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 OR51L1Q8NGJ5 315 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 OR8D4Q8NGM9 314 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 SVIPQ8NHG7 77 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 SLC7A13Q8TCU3 470 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 HIST1H2ACQ93077 130 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 APOBEC3DQ96AK3 386 aaPredicted RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 SGK3Q96BR1 496 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 DUS3LQ96G46 650 aaKnown RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 PLEKHA8Q96JA3 519 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 PRRC1Q96M27 445 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 ZNF488Q96MN9 340 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 ZNF570Q96NI8 536 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 DUX3Q96PT4 197 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 RAB3IPQ96QF0 476 aaPredicted RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 GPX7Q96SL4 187 aaPredicted RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 NKX3-1Q99801 234 aaPredicted RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 ADAT1Q9BUB4 502 aaKnown RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 CCDC28BQ9BUN5 200 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 TLNRD1Q9H1K6 362 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 KCNN2Q9H2S1 579 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 RERGLQ9H628 205 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 NMNAT1Q9HAN9 279 aaPredicted RBP2.48□□□□□ -2.01
SLIRP-202ENST00000553981 TMBIM4Q9HC24 238 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 ONECUT1Q9UBC0 465 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 AURKCQ9UQB9 309 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 RHBDD3Q9Y3P4 386 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 PCLOQ9Y6V0 5065 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 NBEAL2Q6ZNJ1 2754 aa2.48□□□□□ -2.01
SLIRP-202ENST00000553981 FRAS1Q86XX4 4008 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 TRAV38-1A0A0B4J264 116 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 A0A1B0GVI7 797 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 TMEM247A6NEH6 219 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 ANKRD61A6NGH8 418 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 ODF3BA8MYP8 253 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 F8VVB4 439 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 F8VWA3 439 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 IFNL4K9M1U5 179 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 M0R135 149 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 NME4O00746 187 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 SURF4O15260 269 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 SEMG1P04279 462 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 LIPFP07098 398 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 PSG2P11465 335 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 NCK1P16333 377 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 ZNF823P16415 610 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 PPIBP23284 216 aaKnown RBP2.47□□□□□ -2.01
SLIRP-202ENST00000553981 COX7A1P24310 79 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 PRKXP51817 358 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 SELENOWP63302 87 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 LRRC75BQ2VPJ9 315 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 LRRC23Q53EV4 343 aaPredicted RBP2.47□□□□□ -2.01
SLIRP-202ENST00000553981 LINC01590Q5TEZ4 76 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 FAM53AQ6NSI3 398 aaPredicted RBP2.47□□□□□ -2.01
SLIRP-202ENST00000553981 CCDC121Q6ZUS5 278 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 MBOAT2Q6ZWT7 520 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 PGAP1Q75T13 922 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 SLC16A9Q7RTY1 509 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 RNF144BQ7Z419 303 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 PATL1Q86TB9 770 aaKnown RBP2.47□□□□□ -2.01
SLIRP-202ENST00000553981 OAFQ86UD1 273 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 SBSPONQ8IVN8 264 aa2.47□□□□□ -2.01
SLIRP-202ENST00000553981 C1orf87Q8N0U7 546 aa2.47□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms