RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 SCGNO76038 276 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 GNG10P50151 68 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 RSU1Q15404 277 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 SLC9A3R2Q15599 337 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 HLA-BQ31612 363 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 SLC22A6Q4U2R8 563 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 OPN5Q6U736 354 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 OR4D6Q8NGJ1 314 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 OR4K15Q8NH41 348 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 OR51F2Q8NH61 342 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 CD300LFQ8TDQ1 290 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 RNF133Q8WVZ7 376 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 NDUFAF3Q9BU61 184 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 MRPL13Q9BYD1 178 aaKnown RBP10.76□□□□□ -0.69
SHMT2-207ENST00000553837 SLC35B3Q9H1N7 401 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 ALKBH4Q9NXW9 302 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 HHLA2Q9UM44 414 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 GPR132Q9UNW8 380 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 TMED3Q9Y3Q3 217 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 EML6Q6ZMW3 1958 aa10.76□□□□□ -0.69
SHMT2-207ENST00000553837 MUC3AQ02505 3323 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 NPIPB13A6NJU9 1138 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 NPIPB4C9JG80 1138 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 ONECUT2O95948 504 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 ISG15P05161 165 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 S100A10P60903 97 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 IL15RAQ13261 267 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 MIDNQ504T8 468 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 ACTBL2Q562R1 376 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 SLC25A53Q5H9E4 307 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 CLEC9AQ6UXN8 241 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 RNF144BQ7Z419 303 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 PPP1R3BQ86XI6 285 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 NKAIN3Q8N8D7 197 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 POC1AQ8NBT0 407 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 OR10D4PQ8NGN7 298 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 OR5R1Q8NH85 324 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 OR10C1Q96KK4 312 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 YPEL4Q96NS1 127 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 SCRT1Q9BWW7 348 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 METTL7AQ9H8H3 244 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 SIRT7Q9NRC8 400 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 FAM206AQ9NX38 181 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 GSKIPQ9P0R6 139 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 DOK5Q9P104 306 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 IGLV3-32A0A0A0MS00 114 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 ZFAND5O76080 213 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 F10P00742 488 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 TTRP02766 147 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 RPL12P30050 165 aaKnown RBP10.75□□□□□ -0.69
SHMT2-207ENST00000553837 ZNF41P51814 821 aaPredicted RBP10.75□□□□□ -0.69
SHMT2-207ENST00000553837 LSM6P62312 80 aaKnown RBP10.75□□□□□ -0.69
SHMT2-207ENST00000553837 DNM1P34Q6PK57 102 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 OR2M3Q8NG83 312 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 OR5L2Q8NGL0 311 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 SNIP1Q8TAD8 396 aaKnown RBP10.75□□□□□ -0.69
SHMT2-207ENST00000553837 MR1Q95460 341 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 SLAMF6Q96DU3 332 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 MRGPRX4Q96LA9 322 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 GUCD1Q96NT3 240 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 RASL10BQ96S79 203 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 PBDC1Q9BVG4 233 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 DUSP23Q9BVJ7 150 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 CNTNAP3Q9BZ76 1288 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 ASCL3Q9NQ33 180 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 B3GALT5Q9Y2C3 310 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 GOLT1BQ9Y3E0 138 aa10.75□□□□□ -0.69
SHMT2-207ENST00000553837 A0A1W2PNV4 684 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 K7EPK0 472 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 H2BFMP0C1H6 154 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 CDAP32320 146 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 GAMTQ14353 236 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 CDPF1Q6NVV7 123 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 MRPL14Q6P1L8 145 aaKnown RBP10.74□□□□□ -0.69
SHMT2-207ENST00000553837 RTN4RL2Q86UN3 420 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 FAM71E2Q8N5Q1 922 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 FGGYQ96C11 551 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 CMBLQ96DG6 245 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 ADAT3Q96EY9 351 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-207ENST00000553837 BSCL2Q96G97 398 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-207ENST00000553837 RIMS4Q9H426 269 aaPredicted RBP10.74□□□□□ -0.69
SHMT2-207ENST00000553837 C5orf66Q9H5L9 145 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 PRDM6Q9NQX0 595 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 LUZP4Q9P127 313 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 PILRBQ9UKJ0 227 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 AMDHD2Q9Y303 409 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 HDGFL3Q9Y3E1 203 aa10.74□□□□□ -0.69
SHMT2-207ENST00000553837 TNRC6BQ9UPQ9 1833 aaKnown RBP10.74□□□□□ -0.69
SHMT2-207ENST00000553837 ELOA3CA0A087WX78 387 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-207ENST00000553837 CEACAM18A8MTB9 384 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 TRAF3IP2O43734 574 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-207ENST00000553837 PDGFBP01127 241 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-207ENST00000553837 G0S2P27469 103 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 MMP16P51512 607 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 RPS23P62266 143 aaKnown RBP10.73□□□□□ -0.69
SHMT2-207ENST00000553837 SURF2Q15527 256 aaPredicted RBP10.73□□□□□ -0.69
SHMT2-207ENST00000553837 ANKRD55Q3KP44 614 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 HIST2H3PS2Q5TEC6 136 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 PRAMEF20Q5VT98 475 aa10.73□□□□□ -0.69
SHMT2-207ENST00000553837 CARD17Q5XLA6 110 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms