RNA–Protein interactions for RNA: ENST00000553576.5

VIPAS39-204, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 547 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-204ENST00000553576 PLP2Q04941 152 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 PDZK1IP1Q13113 114 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 SURF2Q15527 256 aaPredicted RBP5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 ATP1A1-AS1Q5TC04 95 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 ELP2Q6IA86 826 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 LPCAT3Q6P1A2 487 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 PLXDC2Q6UX71 529 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 NUFIP2Q7Z417 695 aaKnown RBP5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 TMEM200AQ86VY9 491 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 LHFPL1Q86WI0 220 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 C12orf45Q8N5I9 185 aaPredicted RBP5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 PRSS33Q8NF86 280 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FDCSPQ8NFU4 85 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 OR4S1Q8NGB4 309 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 OR1K1Q8NGR3 316 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 OR2T35Q8NGX2 323 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 OR4K15Q8NH41 348 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 OR2AE1Q8NHA4 323 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 NUDCD2Q8WVJ2 157 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 SNAPC3Q92966 411 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FBXW5Q969U6 566 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 MRGPRFQ96AM1 343 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 DACT3Q96B18 629 aaPredicted RBP5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 BORCS8Q96FH0 119 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 WBP1Q96G27 269 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 ARHGAP5-AS1Q96IT6 56 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 DEFB127Q9H1M4 99 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 POFUT1Q9H488 388 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 HEXA-AS1Q9H8Q6 139 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 IFT46Q9NQC8 304 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 GPR173Q9NS66 373 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 CLCF1Q9UBD9 225 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 EIF3KQ9UBQ5 218 aaKnown RBP5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 ZNF69Q9UC07 566 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 SHPKQ9UHJ6 478 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 OPN4Q9UHM6 478 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 EDARQ9UNE0 448 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 SLC7A11Q9UPY5 501 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 VSIG4Q9Y279 399 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 LIPGQ9Y5X9 500 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 FREM2Q5SZK8 3169 aa5.19□□□□□ -1.58
VIPAS39-204ENST00000553576 A0A1W2PP11 408 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 PQLC2LA1A4F0 135 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 SLC22A20A6NK97 555 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 OR2AT4A6NND4 320 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 AHRRA9YTQ3 701 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 MCRIP1C9JLW8 97 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 PROB1E7EW31 1015 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 RAD51DO75771 328 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 SLC22A5O76082 557 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 IL18BPO95998 194 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 CSTBP04080 98 aaKnown RBP5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 IFNA6P05013 189 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 TMEM225BP0DP42 221 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 WT1P19544 449 aaPredicted RBP5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 SERPINA2P20848 420 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 NFYAP23511 347 aaPredicted RBP5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 DTYMKP23919 212 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 ECI1P42126 302 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 CCL11P51671 97 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 FOXG1P55316 489 aaPredicted RBP5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 PER3P56645 1201 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 H2BFSP57053 126 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 TAS2R31P59538 309 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 TAS2R46P59540 309 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 GMFBP60983 142 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 DHRS2Q13268 280 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 RSU1Q15404 277 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 SRSF7Q16629 238 aaKnown RBP eCLIP5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 MICBQ29980 383 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 C2orf68Q2NKX9 166 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 CEACAM21Q3KPI0 293 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 C4orf46Q504U0 113 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 TMEM128Q5BJH2 165 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 NHLRC3Q5JS37 347 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 LY6G6FQ5SQ64 297 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 SIGIRRQ6IA17 410 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 OR52W1Q6IF63 320 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 RPUSD3Q6P087 351 aaKnown RBP5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 TMEM65Q6PI78 240 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 TEX261Q6UWH6 196 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 DHRS11Q6UWP2 260 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 MOB3CQ70IA8 216 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 OVCH2Q7RTZ1 564 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 LYG2Q86SG7 212 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 PEG10Q86TG7 708 aaKnown RBP5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 TMEM17Q86X19 198 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 OR5AP2Q8NGF4 316 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 OR5A2Q8NGI9 324 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 OR52B4Q8NGK2 314 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 OR5L1Q8NGL2 311 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 LILRB4Q8NHJ6 448 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 MITD1Q8WV92 249 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 PIGCQ92535 297 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 SARAFQ96BY9 339 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 C20orf173Q96LM9 149 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 DHRS9Q9BPW9 319 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 CLEC4MQ9H2X3 399 aaPredicted RBP5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 RHOFQ9HBH0 211 aa5.18□□□□□ -1.58
VIPAS39-204ENST00000553576 CA10Q9NS85 328 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms