RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 SULT1C4O75897 302 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 MPZP25189 248 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 DUSP1P28562 367 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 NPBWR2P48146 333 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 BMXP51813 675 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 RAG2P55895 527 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 COL10A1Q03692 680 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 SMN1Q16637 294 aaKnown RBP14.88□□□□□ -0.03
SHMT2-206ENST00000553529 TMEM200BQ69YZ2 307 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 LHFPL3Q86UP9 236 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 ZNF573Q86YE8 665 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 TPRX1Q8N7U7 411 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 PELI1Q96FA3 418 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 C4orf36Q96KX1 117 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 ZNF649Q9BS31 505 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 CHST5Q9GZS9 411 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 NOX4Q9NPH5 578 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 ZNRD1Q9P1U0 126 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 GMPPBQ9Y5P6 360 aa14.88□□□□□ -0.03
SHMT2-206ENST00000553529 DAPL1A0PJW8 107 aa14.87□□□□□ -0.03
SHMT2-206ENST00000553529 MEIOCA2RUB1 952 aa14.87□□□□□ -0.03
SHMT2-206ENST00000553529 J3QLW9 94 aa14.87□□□□□ -0.03
SHMT2-206ENST00000553529 SPRY1O43609 319 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-206ENST00000553529 ANGPTL7O43827 346 aa14.87□□□□□ -0.03
SHMT2-206ENST00000553529 CLIC3O95833 236 aa14.87□□□□□ -0.03
SHMT2-206ENST00000553529 DBTP11182 482 aaKnown RBP14.87□□□□□ -0.03
SHMT2-206ENST00000553529 ZNF19P17023 458 aa14.87□□□□□ -0.03
SHMT2-206ENST00000553529 COX7A1P24310 79 aa14.87□□□□□ -0.03
SHMT2-206ENST00000553529 SNRPGP62308 76 aaKnown RBP14.87□□□□□ -0.03
SHMT2-206ENST00000553529 OCLNQ16625 522 aa14.87□□□□□ -0.03
SHMT2-206ENST00000553529 SMIM21Q3B7S5 101 aa14.87□□□□□ -0.03
SHMT2-206ENST00000553529 CRIP3Q6Q6R5 217 aa14.87□□□□□ -0.03
SHMT2-206ENST00000553529 ZNF782Q6ZMW2 699 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-206ENST00000553529 SLC25A26Q70HW3 274 aa14.87□□□□□ -0.03
SHMT2-206ENST00000553529 TCF23Q7RTU1 214 aa14.87□□□□□ -0.03
SHMT2-206ENST00000553529 LDLRAD3Q86YD5 345 aa14.87□□□□□ -0.03
SHMT2-206ENST00000553529 FGGYQ96C11 551 aa14.87□□□□□ -0.03
SHMT2-206ENST00000553529 RBFOX1Q9NWB1 397 aaKnown RBP14.87□□□□□ -0.03
SHMT2-206ENST00000553529 TMEM82A0PJX8 343 aa14.86□□□□□ -0.03
SHMT2-206ENST00000553529 MEGF11A6BM72 1044 aa14.86□□□□□ -0.03
SHMT2-206ENST00000553529 SLC16A6O15403 523 aa14.86□□□□□ -0.03
SHMT2-206ENST00000553529 NOS1APO75052 506 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-206ENST00000553529 IGHA1P01876 353 aa14.86□□□□□ -0.03
SHMT2-206ENST00000553529 JUNBP17275 347 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-206ENST00000553529 BCL3P20749 454 aa14.86□□□□□ -0.03
SHMT2-206ENST00000553529 POU3F4P49335 361 aa14.86□□□□□ -0.03
SHMT2-206ENST00000553529 ZFP1Q6P2D0 407 aa14.86□□□□□ -0.03
SHMT2-206ENST00000553529 METAP1DQ6UB28 335 aaPredicted RBP14.86□□□□□ -0.03
SHMT2-206ENST00000553529 FAM220AQ7Z4H9 259 aa14.86□□□□□ -0.03
SHMT2-206ENST00000553529 PQLC1Q8N2U9 271 aa14.86□□□□□ -0.03
SHMT2-206ENST00000553529 RFKQ969G6 155 aa14.86□□□□□ -0.03
SHMT2-206ENST00000553529 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP14.86□□□□□ -0.03
SHMT2-206ENST00000553529 EXOGQ9Y2C4 368 aaKnown RBP14.86□□□□□ -0.03
SHMT2-206ENST00000553529 ORC6Q9Y5N6 252 aa14.86□□□□□ -0.03
SHMT2-206ENST00000553529 IGKV1-12A0A0C4DH73 117 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 H0YAE9 185 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 ZNF737O75373 536 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 IGKV1D-12P01611 117 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 TK1P04183 234 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 BPIFB3P59826 476 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 IL24Q13007 206 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 LDLRAD2Q5SZI1 272 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 LHFPL4Q7Z7J7 247 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 CMTM4Q8IZR5 234 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 DYNAPQ8N1N2 210 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 ASCC1Q8N9N2 400 aaKnown RBP14.85□□□□□ -0.03
SHMT2-206ENST00000553529 OR52N4Q8NGI2 321 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 OR5D18Q8NGL1 313 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 SSMEM1Q8WWF3 244 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 WFDC12Q8WWY7 111 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 ALG8Q9BVK2 526 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 PKIBQ9C010 78 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 CHST6Q9GZX3 395 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 RASL12Q9NYN1 266 aa14.85□□□□□ -0.03
SHMT2-206ENST00000553529 TRRAPQ9Y4A5 3859 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 OR4C45A6NMZ5 311 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 DHRS7CA6NNS2 312 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 M0R1W7 72 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 GPR37O15354 613 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 BAG2O95816 211 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 GTF2A1P52655 376 aaPredicted RBP14.84□□□□□ -0.03
SHMT2-206ENST00000553529 DLX6P56179 175 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 RPL31P62899 125 aaKnown RBP14.84□□□□□ -0.03
SHMT2-206ENST00000553529 TMED1Q13445 227 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 LY6EQ16553 131 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 LRRC36Q1X8D7 754 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 C11orf91Q3C1V1 193 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 PLA1AQ53H76 456 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 SLC25A30Q5SVS4 291 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 XAF1Q6GPH4 301 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 SHISA2Q6UWI4 295 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 Q6ZSV7 163 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 ZNF561Q8N587 486 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 TRUB1Q8WWH5 349 aaKnown RBP14.84□□□□□ -0.03
SHMT2-206ENST00000553529 CEP19Q96LK0 163 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 ADI1Q9BV57 179 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 METTL8Q9H825 291 aaKnown RBP14.84□□□□□ -0.03
SHMT2-206ENST00000553529 FAM118AQ9NWS6 357 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 POLDIP2Q9Y2S7 368 aa14.84□□□□□ -0.03
SHMT2-206ENST00000553529 SIGLEC9Q9Y336 463 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms