RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 TEX47Q8TBZ9 253 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 OR51E1Q8TCB6 317 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 BCAS4Q8TDM0 211 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 CMTM5Q96DZ9 223 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 ZNF714Q96N38 554 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 TEAD3Q99594 435 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 NIPSNAP1Q9BPW8 284 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 ZNF649Q9BS31 505 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 DGCR6LQ9BY27 220 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 MYLK2Q9H1R3 596 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 GPR84Q9NQS5 396 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 GPR173Q9NS66 373 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 SLC22A13Q9Y226 551 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 POLDIP2Q9Y2S7 368 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 MINOS1-NBL1R4GNA1 71 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 U3KQK5 164 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 U3KQV3 271 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 DSCAML1Q8TD84 2053 aa7.24□□□□□ -1.25
SYNE2-209ENST00000553308 TMEM269A0A1B0GVZ9 245 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 PQLC2LA1A4F0 135 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 PRR32B1ATL7 298 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 GSC2O15499 205 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 AMY1AP04745 511 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 AMY2AP04746 511 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 ATP6V1B1P15313 513 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 ALOX5APP20292 161 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 ATP6V1B2P21281 511 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 MAGEA2P43356 314 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 ERVK11-1P61568 191 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 MFGE8Q08431 387 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-209ENST00000553308 EDDM3AQ14507 147 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 MICAQ29983 383 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 CYP2R1Q6VVX0 501 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 ASRGL1Q7L266 308 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 GDPD3Q7L5L3 318 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 C16orf82Q7Z2V1 217 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 ZNF573Q86YE8 665 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 ZNF676Q8N7Q3 588 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 TPRX1Q8N7U7 411 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 BBS1Q8NFJ9 593 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 OR4P4Q8NGL7 312 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 AKR1E2Q96JD6 320 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 SLC25A33Q9BSK2 321 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 CLEC7AQ9BXN2 247 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 TTTY10Q9BZA0 68 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 GPR61Q9BZJ8 451 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 PBOV1Q9GZY1 135 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 CCDC134Q9H6E4 229 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 LIN7BQ9HAP6 207 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 ENPP5Q9UJA9 477 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 LAMP5Q9UJQ1 280 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 SAMHD1Q9Y3Z3 626 aaKnown RBP7.23□□□□□ -1.25
SYNE2-209ENST00000553308 SESN1Q9Y6P5 492 aa7.23□□□□□ -1.25
SYNE2-209ENST00000553308 TMEM82A0PJX8 343 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 A6NIN4 97 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 ACOD1A6NK06 481 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 PRR23D1E9PI22 279 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-209ENST00000553308 F8VVB4 439 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 F8VWA3 439 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 H0YHG0 523 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 H3BN98 237 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 MMP23AO75900 390 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 DHRS3O75911 302 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 DNAJC8O75937 253 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-209ENST00000553308 PRR23D2P0DMB1 279 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-209ENST00000553308 H2AFXP16104 143 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-209ENST00000553308 MPZP25189 248 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 HTR1DP28221 377 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 PRDX6P30041 224 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 THBS3P49746 956 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 DCTN2Q13561 401 aaKnown RBP7.22□□□□□ -1.25
SYNE2-209ENST00000553308 NKAPLQ5M9Q1 402 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 TMEM42Q69YG0 159 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 BAIAP2L2Q6UXY1 529 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 C18orf65Q6ZTR6 163 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 ANGPTL5Q86XS5 388 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 CPOQ8IVL8 374 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 PGAM4Q8N0Y7 254 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 OR8H2Q8N162 312 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 OSR2Q8N2R0 312 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 OR10G2Q8NGC3 310 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 OR51D1Q8NGF3 324 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 TRMT10AQ8TBZ6 339 aaKnown RBP7.22□□□□□ -1.25
SYNE2-209ENST00000553308 CAPSLQ8WWF8 208 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 CDRT15Q96T59 188 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 TMEM133Q9H2Q1 129 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 REEP1Q9H902 201 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.22□□□□□ -1.25
SYNE2-209ENST00000553308 NUFIP1Q9UHK0 495 aaKnown RBP7.22□□□□□ -1.25
SYNE2-209ENST00000553308 PCDHGB5Q9Y5G0 923 aa7.22□□□□□ -1.25
SYNE2-209ENST00000553308 DNAH9Q9NYC9 4486 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 hADV38S2A0JD32 116 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 PSMB11A5LHX3 300 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 FAM172BPA6NC97 362 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 H3BUI4 141 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 PRODHO43272 600 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 OR2F2O95006 317 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 IGHA1P01876 353 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 TTRP02766 147 aa7.21□□□□□ -1.26
SYNE2-209ENST00000553308 MRPL3P09001 348 aaKnown RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms