RNA–Protein interactions for RNA: ENST00000553289.5

SYNE2-208, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2

Gene SYNE2, Length 5,261 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-208ENST00000553289 C4orf17Q53FE4 359 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 WDR74Q6RFH5 385 aaPredicted RBP10.26□□□□□ -0.77
SYNE2-208ENST00000553289 C20orf196Q8IYI0 205 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 ZNRF4Q8WWF5 429 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 ERRFI1Q9UJM3 462 aaPredicted RBP10.26□□□□□ -0.77
SYNE2-208ENST00000553289 SLC45A2Q9UMX9 530 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 FAM96BQ9Y3D0 163 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 H3BP45 60 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 ADAM20O43506 726 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 KRASP01116 189 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 SAT2Q96F10 170 aaPredicted RBP10.26□□□□□ -0.77
SYNE2-208ENST00000553289 CLCF1Q9UBD9 225 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 WSB1Q9Y6I7 421 aa10.26□□□□□ -0.77
SYNE2-208ENST00000553289 PAX6P26367 422 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 MPLP40238 635 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 TIAL1Q01085 375 aaKnown RBP eCLIP10.25□□□□□ -0.77
SYNE2-208ENST00000553289 MAFAQ8NHW3 353 aaPredicted RBP10.25□□□□□ -0.77
SYNE2-208ENST00000553289 MOGAT1Q96PD6 335 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 GAL3ST2Q9H3Q3 398 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 ZNF768Q9H5H4 540 aaKnown RBP10.25□□□□□ -0.77
SYNE2-208ENST00000553289 PCOLCE2Q9UKZ9 415 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 SERTM2A0A1B0GWG4 89 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 SPRY3O43610 288 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 SOX15O60248 233 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 LPAR6P43657 344 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 OR3A4PP47883 348 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 SP6Q3SY56 376 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 GGNBP1Q5YKI7 109 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 ADTRPQ96IZ2 230 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 FAAP24Q9BTP7 215 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 WBP1LQ9NX94 342 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 RAB32Q13637 225 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 ZNF528Q3MIS6 628 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 TMEM88Q6PEY1 159 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 OR2C3Q8N628 320 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 WDR61Q9GZS3 305 aaKnown RBP10.25□□□□□ -0.77
SYNE2-208ENST00000553289 CLDN34H7C241 214 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 RGS13O14921 159 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 HNF1AP20823 631 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 ERVFC1-1P60608 527 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 INSL4Q14641 139 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 CBLN3Q6UW01 205 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 C6orf201Q7Z4U5 140 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 SLC35B3Q9H1N7 401 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 AAMDCQ9H7C9 122 aa10.25□□□□□ -0.77
SYNE2-208ENST00000553289 CA6P23280 308 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 SLC37A1P57057 533 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 PPP1CAP62136 330 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 OR5I1Q13606 314 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 STUMQ69YW2 141 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 PWWP2BQ6NUJ5 590 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 OR10AD1Q8NGE0 317 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 RPS4Y2Q8TD47 263 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 ACY3Q96HD9 319 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 ABHD1Q96SE0 405 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 DLEC1Q9Y238 1755 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 MVDP53602 400 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 PSG6Q00889 435 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 IL24Q13007 206 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 FFAR4Q5NUL3 377 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 RPP25Q9BUL9 199 aaKnown RBP10.24□□□□□ -0.77
SYNE2-208ENST00000553289 PECRQ9BY49 303 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 CXXC4Q9H2H0 198 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 LIPT2A6NK58 231 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 IRF3Q14653 427 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 FAM219BQ5XKK7 198 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 TIPARPQ7Z3E1 657 aaKnown RBP10.24□□□□□ -0.77
SYNE2-208ENST00000553289 HSD17B13Q7Z5P4 300 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-208ENST00000553289 OR5C1Q8NGR4 320 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 ZNF230Q9UIE0 474 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-208ENST00000553289 NEU3Q9UQ49 428 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 LRRC3CA6NJW4 275 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 MBPP02686 304 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-208ENST00000553289 CST2P09228 141 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 PTHLHP12272 177 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 HOXB3P14651 431 aaPredicted RBP10.24□□□□□ -0.77
SYNE2-208ENST00000553289 CSF2RBP32927 897 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 MOB3BQ86TA1 216 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 D2HGDHQ8N465 521 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 MOB3AQ96BX8 217 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 GPR87Q9BY21 358 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 FAM60AQ9NP50 221 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 PLA2G3Q9NZ20 509 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 OR6C3Q9NZP0 311 aa10.24□□□□□ -0.77
SYNE2-208ENST00000553289 hADV38S2A0JD32 116 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 C5orf67F2Z3F1 127 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 ONECUT2O95948 504 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 MPGP29372 298 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 MESTQ5EB52 335 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 OR2Y1Q8NGV0 311 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 OR6S1Q8NH40 331 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 C12orf57Q99622 126 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 FAM103A1Q9BTL3 118 aaKnown RBP10.23□□□□□ -0.77
SYNE2-208ENST00000553289 SARGQ9BW04 601 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 FLRT3Q9NZU0 649 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 MAP1LC3B2A6NCE7 125 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 FFAR1O14842 300 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 COL19A1Q14993 1142 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 TMEM241Q24JQ0 296 aa10.23□□□□□ -0.77
SYNE2-208ENST00000553289 LRRTM1Q86UE6 522 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms