RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 ZNF429Q86V71 674 aa10.19□□□□□ -0.78
PPFIA2-227ENST00000552948 OR11L1Q8NGX0 322 aa10.19□□□□□ -0.78
PPFIA2-227ENST00000552948 OR2AE1Q8NHA4 323 aa10.19□□□□□ -0.78
PPFIA2-227ENST00000552948 NECAP2Q9NVZ3 263 aa10.19□□□□□ -0.78
PPFIA2-227ENST00000552948 GNG13Q9P2W3 67 aa10.19□□□□□ -0.78
PPFIA2-227ENST00000552948 IGHV3-15A0A0B4J1V0 119 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 OR5H15A6NDH6 313 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 CXorf65A6NEN9 183 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 SERPINE3A8MV23 424 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 G3V3Y1 287 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 RAMP1O60894 148 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 SLC34A2O95436 690 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 AGAP20933 346 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 APOBEC1P41238 236 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 MNX1P50219 401 aaPredicted RBP10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 OR1N1Q8NGS0 311 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 GPHA2Q96T91 129 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 GABRG3Q99928 467 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 METTL9Q9H1A3 318 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 OSGIN2Q9Y236 505 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 HS3ST3A1Q9Y663 406 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 KLK3P07288 261 aaPredicted RBP10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 CD63P08962 238 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 NKX2-1P43699 371 aaPredicted RBP10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 CSNK1A1P48729 337 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 NKX2-4Q9H2Z4 354 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 LANCL2Q9NS86 450 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 STRAPQ9Y3F4 350 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 LHFPL6Q9Y693 200 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 A0A1B0GV90 55 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 SMCO3A2RU48 225 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 RBFOX3A6NFN3 312 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 NPIPA2E9PIF3 369 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 NPIPA3F8WFD2 350 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 TSPAN2O60636 221 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 SCAF4O95104 1147 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 GAPDHP04406 335 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 DBHP09172 617 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 IFI6P09912 130 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 PRF1P14222 555 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 RNF4P78317 190 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 MRPS34P82930 218 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 COMMD1Q8N668 190 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 LFNGQ8NES3 379 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 OR52M1Q8NGK5 317 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 RAB39BQ96DA2 213 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 MESP1Q9BRJ9 268 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 ABHD14AQ9BUJ0 271 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 ANXA10Q9UJ72 324 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 MCTS1Q9ULC4 181 aaKnown RBP10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 WSB1Q9Y6I7 421 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 SLCO1B1Q9Y6L6 691 aa10.18□□□□□ -0.78
PPFIA2-227ENST00000552948 H3BMH7 237 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 HLA-HP01893 362 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 TRGC2P03986 189 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 SEC11BP0C7V7 166 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 NOVA1P51513 510 aaKnown RBP10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 DLK1P80370 383 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 SSX2Q16385 188 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 LCN15Q6UWW0 184 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 CMTM1Q8IZ96 169 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 OR10S1Q8NGN2 331 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 GATCO43716 136 aaKnown RBP10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 DANCRP0C864 163 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 ZNF16P17020 682 aaPredicted RBP10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 ZNF266Q14584 549 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 TMEM156Q8N614 296 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 NECAP1Q8NC96 275 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 CPNE4Q96A23 557 aaPredicted RBP10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 MOB1AQ9H8S9 216 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 FGF21Q9NSA1 209 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 WBP1LQ9NX94 342 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 ALKBH4Q9NXW9 302 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 CTSDP07339 412 aaPredicted RBP10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 FOLR2P14207 255 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 P2RY1P47900 373 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 RPS23P62266 143 aaKnown RBP10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 QRFPP83859 136 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 RUNX1Q01196 453 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 RAET1LQ5VY80 246 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 KIAA0895LQ68EN5 471 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 WDFY1Q8IWB7 410 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 CCDC71LQ8N9Z2 235 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 NAA60Q9H7X0 242 aa10.17□□□□□ -0.78
PPFIA2-227ENST00000552948 TGIF2-C20orf24A0A0A6YYL0 155 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 NOXO1Q8NFA2 376 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 ST8SIA1Q92185 356 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 PIGCQ92535 297 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 ZNF286AQ9HBT8 521 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 PLA2G2EQ9NZK7 142 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 MSTNO14793 375 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 OR2J2O76002 312 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 IFNA5P01569 189 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 CLPSP04118 112 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 PNLIPP16233 465 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 MPZP25189 248 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 ATP6V0CP27449 155 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 CFPP27918 469 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 OR2C3Q8N628 320 aa10.16□□□□□ -0.78
PPFIA2-227ENST00000552948 CYB561D1Q8N8Q1 229 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms