RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 CHST4Q8NCG5 386 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 ZNF485Q8NCK3 441 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 MAPK1IP1LQ8NDC0 245 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 DEFB108BQ8NET1 73 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 PXT1Q8NFP0 134 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 NANPQ8TBE9 248 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 RAB40AQ8WXH6 277 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 DVL3Q92997 716 aaPredicted RBP8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 MRPS24Q96EL2 167 aaKnown RBP8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 ADAT3Q96EY9 351 aaPredicted RBP8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 NRIP2Q9BQI9 281 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 UQCC2Q9BRT2 126 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 TCF7L1Q9HCS4 588 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 CLEC2DQ9UHP7 191 aa8.59□□□□□ -1.03
TRAFD1-208ENST00000552890 SETD2Q9BYW2 2564 aaPredicted RBP8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 IGHV3-64DA0A0J9YX35 117 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 TRBV5-5A0A0J9YX44 114 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 E9PI62 339 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 SH2D1BO14796 132 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 SIGLEC5O15389 551 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 AKR7A2O43488 359 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 CRLF1O75462 422 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 CHRM2P08172 466 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 FAM157CP0CG43 387 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 TMEM225BP0DP42 221 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 ZNF16P17020 682 aaPredicted RBP8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 SRD5A1P18405 259 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 FPR2P25090 351 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 TGFBR2P37173 567 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 MTNR1BP49286 362 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 GTF2A1P52655 376 aaPredicted RBP8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 TPBGQ13641 420 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 IRF3Q14653 427 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 KISS1Q15726 138 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 KCTD21Q4G0X4 260 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 WDR25Q64LD2 544 aaPredicted RBP8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 GLT8D1Q68CQ7 371 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 STUMQ69YW2 141 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 SFRP4Q6FHJ7 346 aaPredicted RBP8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 LAIR2Q6ISS4 152 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 ZNF529Q6P280 563 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 FAHD2BQ6P2I3 314 aaPredicted RBP8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 ACP7Q6ZNF0 438 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 C1orf122Q6ZSJ8 110 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 ZNF826PQ6ZT77 177 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 SLC25A26Q70HW3 274 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 LINC00596Q86U02 117 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 CALHM1Q8IU99 346 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 OR13C9Q8NGT0 318 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 TRMT10AQ8TBZ6 339 aaKnown RBP8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 RNF166Q96A37 237 aaPredicted RBP8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 SDSLQ96GA7 329 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 FAHD2AQ96GK7 314 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 MGLLQ99685 303 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 NUDT16L1Q9BRJ7 211 aaKnown RBP8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 AKAP9Q99996 3911 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 DOCK11Q5JSL3 2073 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 MALRD1Q5VYJ5 2156 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 ZANQ9Y493 2812 aa8.58□□□□□ -1.04
TRAFD1-208ENST00000552890 WNK2Q9Y3S1 2297 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 C2CD3Q4AC94 2353 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 VPS13CQ709C8 3753 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 NIPBLQ6KC79 2804 aaeCLIP8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 A0A0A6YYJ9 748 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 KIR2DS1A0A191URI9 304 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 GYPAP02724 150 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 CSTBP04080 98 aaKnown RBP8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 UBBP0CG47 229 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 HSMCR30P0CW71 290 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 CPEP16870 476 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 GABRA5P31644 462 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 PRDX2P32119 198 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 ZNF93P35789 620 aaPredicted RBP8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 GABRA2P47869 451 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 KCNJ3P48549 501 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 POU3F4P49335 361 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 ERVK11-1P61568 191 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 ZNF146Q15072 292 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 RSU1Q15404 277 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 CR1LQ2VPA4 569 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 TIMM50Q3ZCQ8 353 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 SPRNQ5BIV9 151 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 FAM120AOSQ5T036 256 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 METTL11BQ5VVY1 283 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 ELP2Q6IA86 826 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 ZNF788Q6ZQV5 615 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 WDR86Q86TI4 376 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 FAM58AQ8N1B3 248 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 KIR3DL3Q8N743 410 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 ANGPTL6Q8NI99 470 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 PGLYRP3Q96LB9 341 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 JMJD8Q96S16 334 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 METTL9Q9H1A3 318 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 C7orf69Q9H7B7 122 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 SPACA1Q9HBV2 294 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 HES4Q9HCC6 221 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 SMURF1Q9HCE7 757 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 SLC25A10Q9UBX3 287 aaPredicted RBP8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 AUP1Q9Y679 476 aa8.57□□□□□ -1.04
TRAFD1-208ENST00000552890 CR1P17927 2039 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms