RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 MICU1Q9BPX6 476 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 JAM3Q9BX67 310 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 ABCB9Q9NP78 766 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 VPREB3Q9UKI3 123 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 SLC22A13Q9Y226 551 aa9.72□□□□□ -0.85
CKAP4-202ENST00000552828 CAB39Q9Y376 341 aaPredicted RBP9.72□□□□□ -0.85
CKAP4-202ENST00000552828 IGHV3OR15-7A0A075B7D8 119 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 A0A1B0GTI1 187 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 hCG_1807616A0A1W2PRN6 198 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 EFCAB10A6NFE3 127 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 A6NLC8 198 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 ZNF850A8MQ14 1090 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 HTR1AP08908 422 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 MYL12AP19105 171 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 TGFBR2P37173 567 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 TGM4P49221 684 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 CSNK2BP67870 215 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 GUCA2AQ02747 115 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 MRPL28Q13084 256 aaKnown RBP9.71□□□□□ -0.86
CKAP4-202ENST00000552828 PRDX4Q13162 271 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 ODF4Q2M2E3 257 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 FBLN7Q53RD9 439 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 WDR38Q5JTN6 314 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 ZBTB37Q5TC79 503 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 DHRS7BQ6IAN0 325 aaPredicted RBP9.71□□□□□ -0.86
CKAP4-202ENST00000552828 FDX2Q6P4F2 183 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 WDR82Q6UXN9 313 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 C1orf122Q6ZSJ8 110 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 KRT74Q7RTS7 529 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 WDR86Q86TI4 376 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 CMTM4Q8IZR5 234 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 PRSS35Q8N3Z0 413 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 FGFRL1Q8N441 504 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 Q8N7P7 452 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 CCDC54Q8NEL0 328 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 OR2G2Q8NGZ5 317 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 C8orf46Q8TAG6 207 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 HAVCR2Q8TDQ0 301 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 GGHQ92820 318 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 TNFRSF14Q92956 283 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 PELI1Q96FA3 418 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 TMEM80Q96HE8 168 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 CCL13Q99616 98 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 ZNF649Q9BS31 505 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 TLNRD1Q9H1K6 362 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 PLCXD1Q9NUJ7 323 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 CHCHD3Q9NX63 227 aaKnown RBP9.71□□□□□ -0.86
CKAP4-202ENST00000552828 FBLN5Q9UBX5 448 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 ENPP5Q9UJA9 477 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 PIGLQ9Y2B2 252 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 ZNF281Q9Y2X9 895 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 DNAH3Q8TD57 4116 aa9.71□□□□□ -0.86
CKAP4-202ENST00000552828 A0A1B0GW55 424 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 DHRS7CA6NNS2 312 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 RNASEK-C17orf49H0YIS7 233 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 SYT7O43581 403 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 UBCP0CG48 685 aaKnown RBP9.7□□□□□ -0.86
CKAP4-202ENST00000552828 DUX4L2P0CJ85 424 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 DUX4L3P0CJ86 424 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 DUX4L4P0CJ87 422 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 DUX4L5P0CJ88 424 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 DUX4L6P0CJ89 424 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 DUX4L7P0CJ90 424 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 LIMS3P0CW19 117 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 LIMS4P0CW20 117 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 PIPP12273 146 aaPredicted RBP9.7□□□□□ -0.86
CKAP4-202ENST00000552828 AMY2BP19961 511 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 CCL1P22362 96 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 CALRP27797 417 aaKnown RBP9.7□□□□□ -0.86
CKAP4-202ENST00000552828 CCR9P51686 369 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 GBX2P52951 348 aaPredicted RBP9.7□□□□□ -0.86
CKAP4-202ENST00000552828 ST3GAL4Q11206 333 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 TMEM244Q5VVB8 128 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 FOXB2Q5VYV0 432 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 LAIR2Q6ISS4 152 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 DUX4L9Q6RFH8 374 aaPredicted RBP9.7□□□□□ -0.86
CKAP4-202ENST00000552828 TMPRSS11AQ6ZMR5 421 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 SLC36A1Q7Z2H8 476 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 C1QL4Q86Z23 238 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 ZDHHC23Q8IYP9 409 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 BPIFB6Q8NFQ5 453 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 OR1M1Q8NGA1 313 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 OR14K1Q8NGZ2 314 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 OR5R1Q8NH85 324 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 FAM110DQ8TAY7 271 aaPredicted RBP9.7□□□□□ -0.86
CKAP4-202ENST00000552828 LRRC29Q8WV35 223 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 OR5P3Q8WZ94 311 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 RNF166Q96A37 237 aaPredicted RBP9.7□□□□□ -0.86
CKAP4-202ENST00000552828 ITPKCQ96DU7 683 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 DCTN5Q9BTE1 182 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 RTL8AQ9BWD3 113 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 DNTTIP1Q9H147 329 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 ISG20L2Q9H9L3 353 aaKnown RBP9.7□□□□□ -0.86
CKAP4-202ENST00000552828 CNOT2Q9NZN8 540 aaKnown RBP9.7□□□□□ -0.86
CKAP4-202ENST00000552828 FRRS1LQ9P0K9 344 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 ONECUT1Q9UBC0 465 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 DUX4Q9UBX2 424 aa9.7□□□□□ -0.86
CKAP4-202ENST00000552828 DIMT1Q9UNQ2 313 aaKnown RBP9.7□□□□□ -0.86
CKAP4-202ENST00000552828 EXOSC1Q9Y3B2 195 aaKnown RBP9.7□□□□□ -0.86
CKAP4-202ENST00000552828 V9GYS6 101 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms