RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, human

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
USP44-208	ENST00000552440	SLC25A27	O95847	323 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	HPN	P05981	417 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	SNRPC	P09234	159 aa	Known RBP	3.35	□□□□□ -1.87
USP44-208	ENST00000552440	CD99	P14209	185 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	AK4	P27144	223 aa	Predicted RBP	3.35	□□□□□ -1.87
USP44-208	ENST00000552440	TSPO	P30536	169 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	RPS9	P46781	194 aa	Known RBP	3.35	□□□□□ -1.87
USP44-208	ENST00000552440	OR1D4	P47884	311 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	RPL29	P47914	159 aa	Known RBP	3.35	□□□□□ -1.87
USP44-208	ENST00000552440	RND2	P52198	227 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	KRTAP10-6	P60371	365 aa	Predicted RBP	3.35	□□□□□ -1.87
USP44-208	ENST00000552440	KLF17	Q5JT82	389 aa	Predicted RBP	3.35	□□□□□ -1.87
USP44-208	ENST00000552440	MUC21	Q5SSG8	566 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	ZNF324B	Q6AW86	544 aa	Predicted RBP	3.35	□□□□□ -1.87
USP44-208	ENST00000552440	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.35	□□□□□ -1.87
USP44-208	ENST00000552440	CBR4	Q8N4T8	237 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	SMIM20	Q8N5G0	67 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	WDSUB1	Q8N9V3	476 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	OR4M2	Q8NGB6	313 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	OR4F15	Q8NGB8	312 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	AGAP11	Q8TF27	550 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	TNFAIP8L1	Q8WVP5	186 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	C11orf40	Q8WZ69	217 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	FBXL15	Q9H469	300 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	NMNAT1	Q9HAN9	279 aa	Predicted RBP	3.35	□□□□□ -1.87
USP44-208	ENST00000552440	BIN3	Q9NQY0	253 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	SLC7A10	Q9NS82	523 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	OR1A1	Q9P1Q5	309 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	ARMCX1	Q9P291	453 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	ZNF257	Q9Y2Q1	563 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	SBDS	Q9Y3A5	250 aa	Known RBP eCLIP	3.35	□□□□□ -1.87
USP44-208	ENST00000552440	UBIAD1	Q9Y5Z9	338 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	BCL9L	Q86UU0	1499 aa		3.35	□□□□□ -1.87
USP44-208	ENST00000552440	ABCA6	Q8N139	1617 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	UGGT1	Q9NYU2	1555 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	ATP7A	Q04656	1500 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	IQGAP1	P46940	1657 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	RBMY1B	A6NDE4	496 aa	Known RBP	3.34	□□□□□ -1.87
USP44-208	ENST00000552440	RBMY1E	A6NEQ0	496 aa	Known RBP	3.34	□□□□□ -1.87
USP44-208	ENST00000552440	GPR31	O00270	319 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	KPNA4	O00629	521 aa	Predicted RBP	3.34	□□□□□ -1.87
USP44-208	ENST00000552440	CCNK	O75909	580 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	CRYZL1	O95825	349 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	AIFM1	O95831	613 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	CYB5R3	P00387	301 aa	Predicted RBP	3.34	□□□□□ -1.87
USP44-208	ENST00000552440	APOC1	P02654	83 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	HCK	P08631	526 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	MRPL3	P09001	348 aa	Known RBP	3.34	□□□□□ -1.87
USP44-208	ENST00000552440	GIP	P09681	153 aa	Predicted RBP	3.34	□□□□□ -1.87
USP44-208	ENST00000552440	RBMY1D	P0C7P1	496 aa	Known RBP	3.34	□□□□□ -1.87
USP44-208	ENST00000552440	FAM228B	P0C875	321 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	RBMY1A1	P0DJD3	496 aa	Known RBP	3.34	□□□□□ -1.87
USP44-208	ENST00000552440	ADORA2B	P29275	332 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	ESRRG	P62508	458 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	GNG3	P63215	75 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	TEAD2	Q15562	447 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	TRMT12	Q53H54	448 aa	Known RBP	3.34	□□□□□ -1.87
USP44-208	ENST00000552440	ACSBG2	Q5FVE4	666 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	KCTD16	Q68DU8	428 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	CNIH2	Q6PI25	160 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	FAM220A	Q7Z4H9	259 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	DEFB132	Q7Z7B7	95 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	OR5AP2	Q8NGF4	316 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	OR6N1	Q8NGY5	312 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	OR13G1	Q8NGZ3	307 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	SLC37A2	Q8TED4	501 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	RDH5	Q92781	318 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	PGLYRP4	Q96LB8	373 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	QKI	Q96PU8	341 aa	Known RBP eCLIP	3.34	□□□□□ -1.87
USP44-208	ENST00000552440	TAPBPL	Q9BX59	468 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	KRTAP2-2	Q9BYT5	123 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	SIX2	Q9NPC8	291 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	MIEF1	Q9NQG6	463 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	CALY	Q9NYX4	217 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	GSKIP	Q9P0R6	139 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	TP53TG5	Q9Y2B4	290 aa		3.34	□□□□□ -1.87
USP44-208	ENST00000552440	PLEKHG1	Q9ULL1	1385 aa		3.34	□□□□□ -1.88
USP44-208	ENST00000552440	ABCC3	O15438	1527 aa		3.34	□□□□□ -1.88
USP44-208	ENST00000552440	ZBED9	Q6R2W3	1325 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	PCDH11X	Q9BZA7	1347 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	COL16A1	Q07092	1604 aa	Predicted RBP	3.33	□□□□□ -1.88
USP44-208	ENST00000552440	IGHV3OR16-12	A0A075B7B8	117 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	TRAV8-4	A0A0B4J246	113 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	TRIM49D1	C9J1S8	452 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440		K7ENP7	123 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	TOMM40	O96008	361 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440		P01737	135 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	SLC35G6	P0C7Q6	338 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	GNB3	P16520	340 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	RCC1	P18754	421 aa	Predicted RBP	3.33	□□□□□ -1.88
USP44-208	ENST00000552440	HIST1H1T	P22492	207 aa	Predicted RBP	3.33	□□□□□ -1.88
USP44-208	ENST00000552440	SERPINB5	P36952	375 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	ERVK-16	P61578	105 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	PRSS8	Q16651	343 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	CEACAM16	Q2WEN9	425 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	TMEM215	Q68D42	235 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	SFXN4	Q6P4A7	337 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	CARM1	Q86X55	608 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	HOGA1	Q86XE5	327 aa		3.33	□□□□□ -1.88
USP44-208	ENST00000552440	CATSPER3	Q86XQ3	398 aa		3.33	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms