RNA–Protein interactions for RNA: ENST00000552301.1

PRPF40B-216, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 912 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-216ENST00000552301 A0A1B0GW55 424 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 GPR37O15354 613 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 NOS1APO75052 506 aaPredicted RBP15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 LIPFP07098 398 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 HCKP08631 526 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 DUX4L2P0CJ85 424 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 DUX4L3P0CJ86 424 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 DUX4L4P0CJ87 422 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 DUX4L5P0CJ88 424 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 DUX4L6P0CJ89 424 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 DUX4L7P0CJ90 424 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 PSG2P11465 335 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 SOX2P48431 317 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 CAPZA1P52907 286 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 WNT4P56705 351 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 PAX2Q02962 417 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 PAX8Q06710 450 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 DUX4L9Q6RFH8 374 aaPredicted RBP15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 ZNF788Q6ZQV5 615 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 SLC25A26Q70HW3 274 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 BTN2A1Q7KYR7 527 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 BATF2Q8N1L9 274 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 CEP19Q96LK0 163 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 GAFA1Q96PS6 74 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 OCEL1Q9H607 264 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 FKBP14Q9NWM8 211 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 DUX4Q9UBX2 424 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 SLC25A10Q9UBX3 287 aaPredicted RBP15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 ZNF281Q9Y2X9 895 aa15.34■□□□□ 0.05
PRPF40B-216ENST00000552301 IGKV1-27A0A075B6S5 117 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 SIGLEC5O15389 551 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 OGG1O15527 345 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 SULT1B1O43704 296 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 INMTO95050 263 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 CDK1P06493 297 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 NDUFB7P17568 137 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 EPHA1P21709 976 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 FIP1L1Q6UN15 594 aaKnown RBP15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 MKXQ8IYA7 352 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 PARP16Q8N5Y8 322 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 ZFP41Q8N8Y5 198 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 TMEM185AQ8NFB2 350 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 RPS4Y2Q8TD47 263 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 H1FXQ92522 213 aaKnown RBP15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 SLAMF9Q96A28 289 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 CPNE2Q96FN4 548 aaPredicted RBP15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 CNBD2Q96M20 576 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 MND1Q9BWT6 205 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 OR14J1Q9UGF5 321 aa15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 RRP15Q9Y3B9 282 aaKnown RBP15.33■□□□□ 0.04
PRPF40B-216ENST00000552301 IGKV1D-17A0A075B6S4 117 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 RFPL4AA6NLU0 287 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 RFPL4AL1F8VTS6 287 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 MAGEB3O15480 346 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 LALBAP00709 142 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 MT-ND2P03891 347 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 TFF1P04155 84 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 ACAA1P09110 424 aaPredicted RBP15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 SELLP14151 372 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 AMY2BP19961 511 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 RAB3AP20336 220 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 Q8IYB0 196 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 BPIFB2Q8N4F0 458 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 RGP1Q92546 391 aaPredicted RBP15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 GHSRQ92847 366 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 EMG1Q92979 244 aaKnown RBP15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 TMEM106AQ96A25 262 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 RFT1Q96AA3 541 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 DACT3Q96B18 629 aaPredicted RBP15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 RPUSD1Q9UJJ7 312 aaKnown RBP15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 RAB26Q9ULW5 256 aa15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 SIRT4Q9Y6E7 314 aaPredicted RBP15.32■□□□□ 0.04
PRPF40B-216ENST00000552301 PNMA8CA0A1B0GUJ8 204 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 KNG1P01042 644 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 PPIAL4GP0DN37 164 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 PPP3R1P63098 170 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 DGUOKQ16854 277 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 YIF1BQ5BJH7 314 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 METTL11BQ5VVY1 283 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 DMKNQ6E0U4 476 aaPredicted RBP15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 NANOGP1Q8N7R0 232 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 ZNF485Q8NCK3 441 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 ZNF418Q8TF45 676 aaPredicted RBP15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 SDSLQ96GA7 329 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 SPACA5Q96QH8 159 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 Q9H521 79 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 HES4Q9HCC6 221 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 MTCH1Q9NZJ7 389 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 ZNF222Q9UK12 451 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 BLOC1S6Q9UL45 172 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 PCDHGB5Q9Y5G0 923 aa15.31■□□□□ 0.04
PRPF40B-216ENST00000552301 ZNF879B4DU55 563 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 SPRY1O43609 319 aaPredicted RBP15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 TCF21O43680 179 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 ALX3O95076 343 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 FPR2P25090 351 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 PRDX2P32119 198 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 CAV3P56539 151 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 FGF12P61328 243 aa15.3■□□□□ 0.04
PRPF40B-216ENST00000552301 ERVK11-1P61568 191 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms