RNA–Protein interactions for RNA: ENST00000551425.1

PTCH1-222, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 241 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-222ENST00000551425 ZNF714Q96N38 554 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 TM2D3Q9BRN9 247 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 CLEC7AQ9BXN2 247 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 DPM3Q9P2X0 92 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 HHLA2Q9UM44 414 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 SESN1Q9Y6P5 492 aa9.39□□□□□ -0.91
PTCH1-222ENST00000551425 TRBV4-1A0A0J9YWV2 114 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 B2RBV5 119 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 EBAG9O00559 213 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 ATP5HO75947 161 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 T-ENOLP0DO92 83 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 FMO3P31513 532 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 INSL3P51460 131 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 ARHGDIBP52566 201 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 SLC35B1P78383 322 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 GABPB1Q06547 395 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-222ENST00000551425 KIR2DS1Q14954 304 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 SNAPC1Q16533 368 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 CEACAM21Q3KPI0 293 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 ZNF260Q3ZCT1 412 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 SLC35F1Q5T1Q4 408 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 HAGHLQ6PII5 290 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-222ENST00000551425 C16orf89Q6UX73 402 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 FKBP9P1Q75LS8 142 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 CBLL1Q75N03 491 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 TCF23Q7RTU1 214 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 ZNF676Q8N7Q3 588 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 OR51L1Q8NGJ5 315 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 RNF133Q8WVZ7 376 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 PGAM5Q96HS1 289 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 HSH2DQ96JZ2 352 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 NOL4LQ96MY1 436 aaPredicted RBP9.38□□□□□ -0.91
PTCH1-222ENST00000551425 CDRT15Q96T59 188 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 FUZQ9BT04 418 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 TMEM133Q9H2Q1 129 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 DCLRE1BQ9H816 532 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 DNAJC27Q9NZQ0 273 aa9.38□□□□□ -0.91
PTCH1-222ENST00000551425 MEX3AA1L020 520 aaKnown RBP9.37□□□□□ -0.91
PTCH1-222ENST00000551425 OR5B21A6NL26 309 aa9.37□□□□□ -0.91
PTCH1-222ENST00000551425 NOS1APO75052 506 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-222ENST00000551425 PSME3P61289 254 aa9.37□□□□□ -0.91
PTCH1-222ENST00000551425 MEF2CQ06413 473 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-222ENST00000551425 BNIP1Q12981 228 aa9.37□□□□□ -0.91
PTCH1-222ENST00000551425 C8orf82Q6P1X6 216 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-222ENST00000551425 PGAM4Q8N0Y7 254 aa9.37□□□□□ -0.91
PTCH1-222ENST00000551425 FAM86B1Q8N7N1 296 aa9.37□□□□□ -0.91
PTCH1-222ENST00000551425 ZNF511Q8NB15 262 aa9.37□□□□□ -0.91
PTCH1-222ENST00000551425 OR5A2Q8NGI9 324 aa9.37□□□□□ -0.91
PTCH1-222ENST00000551425 ZNF488Q96MN9 340 aa9.37□□□□□ -0.91
PTCH1-222ENST00000551425 NRIP2Q9BQI9 281 aa9.37□□□□□ -0.91
PTCH1-222ENST00000551425 BRD7Q9NPI1 651 aa9.37□□□□□ -0.91
PTCH1-222ENST00000551425 PAPOLBQ9NRJ5 636 aaKnown RBP9.37□□□□□ -0.91
PTCH1-222ENST00000551425 MOB4Q9Y3A3 225 aa9.37□□□□□ -0.91
PTCH1-222ENST00000551425 SIRT4Q9Y6E7 314 aaPredicted RBP9.37□□□□□ -0.91
PTCH1-222ENST00000551425 HSPE1-MOB4S4R3N1 261 aa9.37□□□□□ -0.91
PTCH1-222ENST00000551425 ZNF737O75373 536 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 HCKP08631 526 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 RHCEP18577 417 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 OPRL1P41146 370 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 CDX1P47902 265 aaPredicted RBP9.36□□□□□ -0.91
PTCH1-222ENST00000551425 RASSF2P50749 326 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 EDDM3BP56851 147 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 BDH1Q02338 343 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 DEFB136Q30KP8 78 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 CEP78Q5JTW2 689 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 LCNL1Q6ZST4 164 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 SLC15A3Q8IY34 581 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 DHRS1Q96LJ7 313 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 ABHD6Q9BV23 337 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 HES4Q9HCC6 221 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 SPAG4Q9NPE6 437 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 NDUFAF4Q9P032 175 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 FAM32AQ9Y421 112 aaKnown RBP9.36□□□□□ -0.91
PTCH1-222ENST00000551425 RYR1P21817 5038 aa9.36□□□□□ -0.91
PTCH1-222ENST00000551425 hADV38S2A0JD32 116 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 SERPINE3A8MV23 424 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 LEUTXA8MZ59 168 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 LDLRAD4O15165 306 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 NXPH2O95156 264 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 FHL3Q13643 280 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 FAM27D1Q5T7N8 215 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 TEX38Q6PEX7 206 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 LHFPL2Q6ZUX7 228 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 GDPD3Q7L5L3 318 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 DEFB107AQ8IZN7 70 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 LINC00471Q8N535 108 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 ASCC1Q8N9N2 400 aaKnown RBP9.35□□□□□ -0.91
PTCH1-222ENST00000551425 ZNF596Q8TC21 504 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 ITFG2Q969R8 447 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 CMTM6Q9NX76 183 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 ABCD2Q9UBJ2 740 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 OR14J1Q9UGF5 321 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 SLC22A13Q9Y226 551 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 LINC00312Q9Y6C7 94 aa9.35□□□□□ -0.91
PTCH1-222ENST00000551425 CCRL2O00421 344 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 CXCR6O00574 342 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 GYG2O15488 501 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 SERPINA1P01009 418 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 IGLV1-47P01700 117 aa9.34□□□□□ -0.91
PTCH1-222ENST00000551425 IGHG2P01859 326 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms