RNA–Protein interactions for RNA: ENST00000550592.1

LIMA1-205, Transcript of LIM domain and actin binding 1, humanhuman

TSL 4

Gene LIMA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-205ENST00000550592 GSTM3P21266 225 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 HMOX2P30519 316 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 CA7P43166 264 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 ARG2P78540 354 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 QPRTQ15274 297 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 SYCP1Q15431 976 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 HNRNPA1L2Q32P51 320 aaKnown RBP3□□□□□ -1.93
LIMA1-205ENST00000550592 C9orf64Q5T6V5 341 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 C1orf185Q5T7R7 199 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 CLEC2AQ6UVW9 174 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 SPESP1Q6UW49 350 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 IGFL3Q6UXB1 125 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 MBOAT1Q6ZNC8 495 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 HORMAD1Q86X24 394 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 GKN2Q86XP6 184 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 OFCC1Q8IZS5 231 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 TMEM86AQ8N2M4 240 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 PDCL2Q8N4E4 241 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 ZFP41Q8N8Y5 198 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 OR9G4Q8NGQ1 327 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 OR5K2Q8NHB8 316 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 ABHD3Q8WU67 409 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 KLK6Q92876 244 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 MRGPRFQ96AM1 343 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 ZMYND19Q96E35 227 aaPredicted RBP3□□□□□ -1.93
LIMA1-205ENST00000550592 PKMYT1Q99640 499 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 CTRCQ99895 268 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 ZYG11BQ9C0D3 744 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 ACTR3CQ9C0K3 210 aaPredicted RBP3□□□□□ -1.93
LIMA1-205ENST00000550592 RDH14Q9HBH5 336 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 RETNQ9HD89 108 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 MRPS30Q9NP92 439 aaKnown RBP3□□□□□ -1.93
LIMA1-205ENST00000550592 FBXO8Q9NRD0 319 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 FAM49BQ9NUQ9 324 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 PSG11Q9UQ72 335 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 TRPM6Q9BX84 2022 aa3□□□□□ -1.93
LIMA1-205ENST00000550592 TCHHQ07283 1943 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 NCOA6Q14686 2063 aaPredicted RBP2.99□□□□□ -1.93
LIMA1-205ENST00000550592 C21orf140B9A014 251 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 F8VP50 259 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 POLR1CO15160 346 aaPredicted RBP2.99□□□□□ -1.93
LIMA1-205ENST00000550592 ENTPD5O75356 428 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 RP2O75695 350 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 CD160O95971 181 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 UBTFL6P0CB48 400 aaPredicted RBP2.99□□□□□ -1.93
LIMA1-205ENST00000550592 PGAM1P18669 254 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 OR1E1P30953 314 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 CEACAM3P40198 252 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 VSX2P58304 361 aaPredicted RBP2.99□□□□□ -1.93
LIMA1-205ENST00000550592 TMED1Q13445 227 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 ITIH4Q14624 930 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 RGNQ15493 299 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 TFDP3Q5H9I0 405 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 ZNF691Q5VV52 312 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 C12orf54Q6X4T0 127 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 Q6ZS92 163 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 IQCF2Q8IXL9 164 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 PGAM4Q8N0Y7 254 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 STK40Q8N2I9 435 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 COMMD1Q8N668 190 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 NPWQ8N729 165 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 DNAAF3Q8N9W5 541 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 TTC29Q8NA56 475 aaPredicted RBP2.99□□□□□ -1.93
LIMA1-205ENST00000550592 FAM184AQ8NB25 1140 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 OR5W2Q8NH69 310 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 CA5BP1Q8WTZ4 195 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 C17orf50Q8WW18 174 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 FAM131CQ96AQ9 280 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 ZNF396Q96N95 335 aaPredicted RBP2.99□□□□□ -1.93
LIMA1-205ENST00000550592 FOPNLQ96NB1 174 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 COL21A1Q96P44 957 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 MICU1Q9BPX6 476 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 ANKRD60Q9BZ19 345 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 ULBP3Q9BZM4 244 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 SAV1Q9H4B6 383 aaPredicted RBP2.99□□□□□ -1.93
LIMA1-205ENST00000550592 ELOVL6Q9H5J4 265 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 RABL2AQ9UBK7 228 aaPredicted RBP2.99□□□□□ -1.93
LIMA1-205ENST00000550592 GGA2Q9UJY4 613 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 TBC1D24Q9ULP9 559 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 BTRCQ9Y297 605 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 MEGF8Q7Z7M0 2845 aa2.99□□□□□ -1.93
LIMA1-205ENST00000550592 RYR3Q15413 4870 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 PIKFYVEQ9Y2I7 2098 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 IGLV1-50A0A075B6I6 118 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 TRAV25A0A0B4J276 109 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 A0A1B0GW55 424 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 H7C0C1 242 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 TDP2O95551 362 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 ARG1P05089 322 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 DUX4L2P0CJ85 424 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 DUX4L3P0CJ86 424 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 DUX4L5P0CJ88 424 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 DUX4L6P0CJ89 424 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 DUX4L7P0CJ90 424 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 IGHV1-8P0DP01 117 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 THRAP10827 490 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 CTRB1P17538 263 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 IGFBP3P17936 291 aaPredicted RBP2.98□□□□□ -1.93
LIMA1-205ENST00000550592 GGT1P19440 569 aa2.98□□□□□ -1.93
LIMA1-205ENST00000550592 EBI3Q14213 229 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms