RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 DUSP23Q9BVJ7 150 aa14.09□□□□□ -0.15
RBFOX1-212ENST00000550418 TLNRD1Q9H1K6 362 aa14.09□□□□□ -0.15
RBFOX1-212ENST00000550418 MBD1Q9UIS9 605 aaPredicted RBP14.09□□□□□ -0.15
RBFOX1-212ENST00000550418 POLDIP2Q9Y2S7 368 aa14.09□□□□□ -0.15
RBFOX1-212ENST00000550418 HAAOP46952 286 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 P2RY1P47900 373 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 TRIM61Q5EBN2 209 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 ZNF468Q5VIY5 522 aaPredicted RBP14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 FAAP24Q9BTP7 215 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 RTL8AQ9BWD3 113 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 NAT8BQ9UHF3 227 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 GCM2O75603 506 aaPredicted RBP14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 SEC11BP0C7V7 166 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 OR3A4PP47883 348 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 TMEM267Q0VDI3 215 aaPredicted RBP14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 ZNF573Q86YE8 665 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 ASB16Q96NS5 453 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 OBP2AQ9NY56 170 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 SEC16AO15027 2179 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 DSPPQ9NZW4 1301 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 C3orf85A0A1B0GTC6 90 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 ACAA1P09110 424 aaPredicted RBP14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 EFNB2P52799 333 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 POLR2GP62487 172 aaKnown RBP eCLIP14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 FOXF1Q12946 379 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 LBHQ53QV2 105 aaPredicted RBP14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 CDC20BQ86Y33 519 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 NOXO1Q8NFA2 376 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 FLRT3Q9NZU0 649 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 SF3B6Q9Y3B4 125 aaKnown RBP14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 CABIN1Q9Y6J0 2220 aa14.08□□□□□ -0.16
RBFOX1-212ENST00000550418 MPTX1A8MV57 137 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 SIRPB1O00241 398 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 CER1O95813 267 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 ZNF547Q8IVP9 402 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 NAT8Q9UHE5 227 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 C4orf47A7E2U8 309 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 MRGPREQ86SM8 312 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 MVB12AQ96EY5 273 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 BET1LQ9NYM9 111 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 HOXB3P14651 431 aaPredicted RBP14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 CSNK1EP49674 416 aaKnown RBP14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 SLC35E1Q96K37 410 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 HIF1ANQ9NWT6 349 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 FKBP11Q9NYL4 201 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 GEMIN2O14893 280 aaKnown RBP14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 ZNF117Q03924 483 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 IL24Q13007 206 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 ZNF141Q15928 474 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 FAM78BQ5VT40 261 aa14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 ADAD2Q8NCV1 583 aaKnown RBP14.07□□□□□ -0.16
RBFOX1-212ENST00000550418 SH2D1BO14796 132 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 CTSVO60911 334 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 EIF3GO75821 320 aaKnown RBP eCLIP14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 CLDN15P56746 228 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 DGAT2L6Q6ZPD8 337 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 RPS19BP1Q86WX3 136 aaKnown RBP14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 C20orf196Q8IYI0 205 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 MS4A3Q96HJ5 214 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 CHRDL1Q9BU40 450 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 COL11A1P12107 1806 aaPredicted RBP14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 FCN1O00602 326 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 HEXAP06865 529 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 FGF8P55075 233 aaPredicted RBP14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 SUMO3P55854 103 aaPredicted RBP14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 RAB35Q15286 201 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 ISXQ2M1V0 245 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 LAMTOR1Q6IAA8 161 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 KIAA1324LA8MWY0 1029 aaPredicted RBP14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 K7EQM0 130 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 NRG2O14511 850 aaPredicted RBP14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 LIMS1P48059 325 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 SLC38A11Q08AI6 406 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 ZIC1Q15915 447 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 LSRQ86X29 649 aaPredicted RBP14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 OR5AS1Q8N127 324 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 IL17BQ9UHF5 180 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 PRSS50Q9UI38 385 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 VSIG4Q9Y279 399 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 HDGFL3Q9Y3E1 203 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 RER1O15258 196 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 CASP6P55212 293 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 OR1D5P58170 312 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 FFAR4Q5NUL3 377 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 VN1R4Q7Z5H5 301 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 AGBL5Q8NDL9 886 aa14.06□□□□□ -0.16
RBFOX1-212ENST00000550418 OR2A5Q96R48 311 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 LANCL2Q9NS86 450 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 SOCS1O15524 211 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 PPP2CBP62714 309 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 PPP2CAP67775 309 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 MICBQ29980 383 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 ZDHHC23Q8IYP9 409 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 ADPRHL1Q8NDY3 354 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 WNT2BQ93097 391 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 APH1AQ96BI3 265 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 NEIL1Q96FI4 390 aaPredicted RBP14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 DHRS3O75911 302 aa14.05□□□□□ -0.16
RBFOX1-212ENST00000550418 GPR12P47775 334 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms