RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 SIRT4Q9Y6E7 314 aaPredicted RBP8.04□□□□□ -1.12
HDAC7-229ENST00000549883 KIAA2026Q5HYC2 2103 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 IGHV1-69DA0A0B4J2H0 117 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 A0A0U1RQK1 487 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 TMEM89A2RUT3 159 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 RNASEK-C17orf49H0YIS7 233 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 HOXA3O43365 443 aaPredicted RBP8.03□□□□□ -1.12
HDAC7-229ENST00000549883 SPRY1O43609 319 aaPredicted RBP8.03□□□□□ -1.12
HDAC7-229ENST00000549883 MPZL2O60487 215 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 NXPH2O95156 264 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 ZFPL1O95159 310 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 ECDO95905 644 aaPredicted RBP8.03□□□□□ -1.12
HDAC7-229ENST00000549883 IGHV1-69P01742 117 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 LIPFP07098 398 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 UBCP0CG48 685 aaKnown RBP8.03□□□□□ -1.12
HDAC7-229ENST00000549883 PRTN3P24158 256 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 PRDX2P32119 198 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 NPBWR2P48146 333 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 RAB40BQ12829 278 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 ALKBH1Q13686 389 aaKnown RBP8.03□□□□□ -1.12
HDAC7-229ENST00000549883 OR2G6Q5TZ20 316 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 GPR157Q5UAW9 335 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 TMEM244Q5VVB8 128 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 RBMS3Q6XE24 437 aaKnown RBP8.03□□□□□ -1.12
HDAC7-229ENST00000549883 SLC25A26Q70HW3 274 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 KCTD20Q7Z5Y7 419 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 ZNF555Q8NEP9 628 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 OR4M1Q8NGD0 313 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 ZFAND2BQ8WV99 257 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 GCDHQ92947 438 aaPredicted RBP8.03□□□□□ -1.12
HDAC7-229ENST00000549883 TNFRSF14Q92956 283 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 ITFG2Q969R8 447 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 SDSLQ96GA7 329 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 MED30Q96HR3 178 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 JMJD8Q96S16 334 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 NKX3-1Q99801 234 aaPredicted RBP8.03□□□□□ -1.12
HDAC7-229ENST00000549883 PKIBQ9C010 78 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 DNTTIP1Q9H147 329 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 CLEC2DQ9UHP7 191 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 PCDHGB1Q9Y5G3 927 aa8.03□□□□□ -1.12
HDAC7-229ENST00000549883 TENM1Q9UKZ4 2725 aa8.02□□□□□ -1.12
HDAC7-229ENST00000549883 IGKV1-12A0A0C4DH73 117 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 ANGPTL7O43827 346 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 FADS2O95864 444 aaKnown RBP8.02□□□□□ -1.13
HDAC7-229ENST00000549883 LALBAP00709 142 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 IGKV1D-12P01611 117 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 ISG15P05161 165 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 ATF1P18846 271 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 AZGP1P25311 298 aaKnown RBP8.02□□□□□ -1.13
HDAC7-229ENST00000549883 PAX6P26367 422 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 DUSP1P28562 367 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 POU3F4P49335 361 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 CCR9P51686 369 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 CAPZA1P52907 286 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 CAV3P56539 151 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 ACTA2P62736 377 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 ACTG2P63267 376 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 IL24Q13007 206 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 SMIM21Q3B7S5 101 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 OGFRL1Q5TC84 451 aaPredicted RBP8.02□□□□□ -1.13
HDAC7-229ENST00000549883 ASPHD2Q6ICH7 369 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 HCP5Q6MZN7 132 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 FAM185AQ8N0U4 392 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 SYS1Q8N2H4 156 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 ZNF676Q8N7Q3 588 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 OR13C3Q8NGS6 347 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 OR13C9Q8NGT0 318 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 C17orf50Q8WW18 174 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 NRG4Q8WWG1 115 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 ORAI1Q96D31 301 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 Q96MT0 163 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 RDH12Q96NR8 316 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 PRDM13Q9H4Q3 707 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 FGF20Q9NP95 211 aaPredicted RBP8.02□□□□□ -1.13
HDAC7-229ENST00000549883 RBFOX1Q9NWB1 397 aaKnown RBP8.02□□□□□ -1.13
HDAC7-229ENST00000549883 RASL12Q9NYN1 266 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 HHLA2Q9UM44 414 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 SLC7A11Q9UPY5 501 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 POLDIP2Q9Y2S7 368 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 RPL36Q9Y3U8 105 aaKnown RBP8.02□□□□□ -1.13
HDAC7-229ENST00000549883 KPTNQ9Y664 436 aa8.02□□□□□ -1.13
HDAC7-229ENST00000549883 A0A1W2PQ09 198 aa8.01□□□□□ -1.13
HDAC7-229ENST00000549883 TMEM82A0PJX8 343 aa8.01□□□□□ -1.13
HDAC7-229ENST00000549883 SNTNA6NMZ2 147 aa8.01□□□□□ -1.13
HDAC7-229ENST00000549883 CASQ2O14958 399 aaPredicted RBP8.01□□□□□ -1.13
HDAC7-229ENST00000549883 GATBO75879 557 aaKnown RBP8.01□□□□□ -1.13
HDAC7-229ENST00000549883 IGHV4-59P01825 116 aa8.01□□□□□ -1.13
HDAC7-229ENST00000549883 RNASE1P07998 156 aaKnown RBP8.01□□□□□ -1.13
HDAC7-229ENST00000549883 MELTFP08582 738 aa8.01□□□□□ -1.13
HDAC7-229ENST00000549883 PIPP12273 146 aaPredicted RBP8.01□□□□□ -1.13
HDAC7-229ENST00000549883 CCL3L1P16619 93 aa8.01□□□□□ -1.13
HDAC7-229ENST00000549883 ZNF20P17024 532 aa8.01□□□□□ -1.13
HDAC7-229ENST00000549883 BCL3P20749 454 aa8.01□□□□□ -1.13
HDAC7-229ENST00000549883 OMGP23515 440 aa8.01□□□□□ -1.13
HDAC7-229ENST00000549883 CFPP27918 469 aa8.01□□□□□ -1.13
HDAC7-229ENST00000549883 FUT6P51993 359 aa8.01□□□□□ -1.13
HDAC7-229ENST00000549883 SNU13P55769 128 aaKnown RBP8.01□□□□□ -1.13
HDAC7-229ENST00000549883 MTCP1P56278 107 aa8.01□□□□□ -1.13
HDAC7-229ENST00000549883 COL10A1Q03692 680 aa8.01□□□□□ -1.13
HDAC7-229ENST00000549883 ZNF273Q14593 569 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms