RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 A1L4Q6 167 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 LRP5LA4QPB2 252 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 FABP12A6NFH5 140 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 F8VVB4 439 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 F8VWA3 439 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 SYNGR1O43759 233 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 RHBDL1O75783 438 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 MPIG6BO95866 241 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 SFTPBP07988 381 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 OR4A8P0C604 315 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 UBBP0CG47 229 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 TMEM225BP0DP42 221 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 PTHLHP12272 177 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 SERPINA2P20848 420 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 RBMXP38159 391 aaKnown RBP6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 KIR2DL3P43628 341 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 NPBWR2P48146 333 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 CAPZA1P52907 286 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 PPP5CP53041 499 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 IFITM3Q01628 133 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 DAZAP2Q15038 168 aaPredicted RBP6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 FAM76BQ5HYJ3 339 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 PRAMEF6Q5VXH4 476 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 HAGHLQ6PII5 290 aaPredicted RBP6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 C11orf53Q8IXP5 236 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 SAXO1Q8IYX7 474 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 BATF2Q8N1L9 274 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 ZSCAN4Q8NAM6 433 aaPredicted RBP6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 OR13G1Q8NGZ3 307 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 OR8S1Q8NH09 359 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 GCDHQ92947 438 aaPredicted RBP6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 BORCS5Q969J3 196 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 SLAMF9Q96A28 289 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 CPNE2Q96FN4 548 aaPredicted RBP6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 Q96M66 194 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 HIST1H2AAQ96QV6 131 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 ABHD1Q96SE0 405 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 MICU1Q9BPX6 476 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 TMEM59Q9BXS4 323 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 SLC22A4Q9H015 551 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 METTL9Q9H1A3 318 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 LPAR5Q9H1C0 372 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 CXXC4Q9H2H0 198 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 IL36GQ9NZH8 169 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 ZNF581Q9P0T4 197 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 GHRLQ9UBU3 117 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 POU2F3Q9UKI9 436 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 RAB22AQ9UL26 194 aa6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 ANKHD1Q8IWZ3 2542 aaKnown RBP6.86□□□□□ -1.31
DEPDC4-207ENST00000549249 DSCAMO60469 2012 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 A0A1W2PPR1 153 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 TMEM210A6NLX4 147 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 FOXI3A8MTJ6 420 aaPredicted RBP6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 J3QT63 122 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 RAB27BO00194 218 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 SOCS1O15524 211 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 XRCC3O43542 346 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 CRTAPO75718 401 aaPredicted RBP6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 HTR3BO95264 441 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 PTBP3O95758 552 aaKnown RBP6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 IGHV1-46P01743 117 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 HLA-DQB1P01920 261 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 MGMTP16455 207 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 BCL3P20749 454 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 PTBP1P26599 531 aaKnown RBP eCLIP6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 CD200P41217 278 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 MNDAP41218 407 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 PITPNBP48739 271 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 TAS2R20P59543 309 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 RPS27AP62979 156 aaKnown RBP6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 HOXA4Q00056 320 aaPredicted RBP6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 IL24Q13007 206 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 IL18Q14116 193 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 MPPED2Q15777 294 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 BAK1Q16611 211 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 MST1LQ2TV78 715 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 ZNF672Q499Z4 452 aaPredicted RBP6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 HIST2H2BCQ6DN03 193 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 CDH24Q86UP0 819 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 TMEM200AQ86VY9 491 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 ZNF573Q86YE8 665 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 SCCPDHQ8NBX0 429 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 Q8NFD4 153 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 OR2Z1Q8NG97 314 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 OR51F2Q8NH61 342 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 KCNG3Q8TAE7 436 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 FAM222BQ8WU58 562 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 AQP3Q92482 292 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 ELMOD3Q96FG2 381 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 ZNF488Q96MN9 340 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 TM2D1Q9BX74 207 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 PKIBQ9C010 78 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 TLNRD1Q9H1K6 362 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 ATG5Q9H1Y0 275 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 PLK3Q9H4B4 646 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 ELL3Q9HB65 397 aaPredicted RBP6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 RBFOX1Q9NWB1 397 aaKnown RBP6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 MTCH1Q9NZJ7 389 aa6.85□□□□□ -1.31
DEPDC4-207ENST00000549249 IL36RNQ9UBH0 155 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms