RNA–Protein interactions for RNA: ENST00000547950.1

SCAF11-211, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-211ENST00000547950 ZSCAN4Q8NAM6 433 aaPredicted RBP5.48□□□□□ -1.53
SCAF11-211ENST00000547950 POC1AQ8NBT0 407 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 OR51G2Q8NGK0 314 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 OR5D13Q8NGL4 314 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 OR14K1Q8NGZ2 314 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 OR2T27Q8NH04 317 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 TRMT10AQ8TBZ6 339 aaKnown RBP5.48□□□□□ -1.53
SCAF11-211ENST00000547950 TMEM163Q8TC26 289 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 C17orf50Q8WW18 174 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 LRTOMTQ8WZ04 291 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 RORBQ92753 470 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 TNFRSF14Q92956 283 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ITFG2Q969R8 447 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 SDSLQ96GA7 329 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ADI1Q9BV57 179 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 PPA2Q9H2U2 334 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ADGRL4Q9HBW9 690 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 TCF7L1Q9HCS4 588 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 C19orf12Q9NSK7 152 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 CLN6Q9NWW5 311 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 FAM53CQ9NYF3 392 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ZNRD1Q9P1U0 126 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 OR14J1Q9UGF5 321 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 MRM2Q9UI43 246 aaKnown RBP5.48□□□□□ -1.53
SCAF11-211ENST00000547950 ZNF222Q9UK12 451 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 SNX5Q9Y5X3 404 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 R4GMQ9 66 aa5.48□□□□□ -1.53
SCAF11-211ENST00000547950 PKD1L1Q8TDX9 2849 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 TRBV23-1A0A0A0MS06 115 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 A0A1B0GTI1 187 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 A0A1W2PQL4 384 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-211ENST00000547950 MEX3AA1L020 520 aaKnown RBP5.47□□□□□ -1.53
SCAF11-211ENST00000547950 J3QT63 122 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 M0QZ24 198 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 DLGAP1O14490 977 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 SRSF10O75494 262 aaKnown RBP5.47□□□□□ -1.53
SCAF11-211ENST00000547950 KRT8P05787 483 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 PGA5P0DJD9 388 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 PIPP12273 146 aaPredicted RBP5.47□□□□□ -1.53
SCAF11-211ENST00000547950 PAX6P26367 422 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 TGFBR2P37173 567 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 RASSF2P50749 326 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 PROK1P58294 105 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 RPL15P61313 204 aaKnown RBP5.47□□□□□ -1.53
SCAF11-211ENST00000547950 RPL31P62899 125 aaKnown RBP5.47□□□□□ -1.53
SCAF11-211ENST00000547950 EGR3Q06889 387 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 LY6EQ16553 131 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 SMIM21Q3B7S5 101 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 MIDNQ504T8 468 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 KDM4DQ6B0I6 523 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 SLC35E4Q6ICL7 350 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 HCP5Q6MZN7 132 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 FDX2Q6P4F2 183 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 SSX6Q7RTT6 188 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 GID4Q8IVV7 300 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 MKXQ8IYA7 352 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 OR10H4Q8NGA5 316 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 MNTQ99583 582 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 CIB1Q99828 191 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 SSX3Q99909 188 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 CITED1Q99966 193 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 RBM4BQ9BQ04 359 aaKnown RBP5.47□□□□□ -1.53
SCAF11-211ENST00000547950 NRIP2Q9BQI9 281 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 FAM234AQ9H0X4 552 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 RIBC2Q9H4K1 309 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 HEXA-AS1Q9H8Q6 139 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 VPREB3Q9UKI3 123 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 SLC7A11Q9UPY5 501 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 V9GYS6 101 aa5.47□□□□□ -1.53
SCAF11-211ENST00000547950 hCG_1809904A0A1W2PP81 198 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 A0A1W2PPE2 198 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 A0A1W2PPH5 198 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 A0A1W2PR64 198 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 A0A1W2PRV1 198 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 PQLC2LA1A4F0 135 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 METTL15A6NJ78 407 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 SAC3D1A6NKF1 404 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 H3BUX3 64 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 TIMM23O14925 209 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 SYT7O43581 403 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 NOS1APO75052 506 aaPredicted RBP5.46□□□□□ -1.54
SCAF11-211ENST00000547950 ATP5HO75947 161 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 CLPXO76031 633 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 SERPINA3P01011 423 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 TK1P04183 234 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 OR2T7P0C7T2 308 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 FCGR1AP12314 374 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 CCL3L1P16619 93 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 COX7A1P24310 79 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 HTR1FP30939 366 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 LGALS4P56470 323 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 COL10A1Q03692 680 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 TMEM42Q69YG0 159 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 ASPHD2Q6ICH7 369 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 CALHM1Q8IU99 346 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 RDH10Q8IZV5 341 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 ZNF561Q8N587 486 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 ASCC1Q8N9N2 400 aaKnown RBP5.46□□□□□ -1.54
SCAF11-211ENST00000547950 BEND2Q8NDZ0 799 aa5.46□□□□□ -1.54
SCAF11-211ENST00000547950 OR5R1Q8NH85 324 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms