RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 PDCD6O75340 191 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 SNAPC5O75971 98 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 AMY2AP04746 511 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 BMP5P22003 454 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 DTYMKP23919 212 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 GABRR1P24046 479 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 ECI1P42126 302 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 RBM11P57052 281 aaKnown RBP11.53□□□□□ -0.56
PTCH1-215ENST00000547672 FGF12P61328 243 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 RRAS2P62070 204 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-215ENST00000547672 NAAAQ02083 359 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 CDK10Q15131 360 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 OR8G1Q15617 311 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 TSC22D1Q15714 1073 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 FAM76BQ5HYJ3 339 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 HOGA1Q86XE5 327 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 FBXL14Q8N1E6 418 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 BPIFB2Q8N4F0 458 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 ARRDC1Q8N5I2 433 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 NAXEQ8NCW5 288 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 ST6GALNAC3Q8NDV1 305 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 OR10K1Q8NGX5 313 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 OR13G1Q8NGZ3 307 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 OR4K15Q8NH41 348 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 KLF14Q8TD94 323 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-215ENST00000547672 ST8SIA4Q92187 359 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 DACT3Q96B18 629 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-215ENST00000547672 S100PBPQ96BU1 408 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 GINS4Q9BRT9 223 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 OR51J1Q9H342 316 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 ZMAT3Q9HA38 289 aaKnown RBP11.53□□□□□ -0.56
PTCH1-215ENST00000547672 MYOZ1Q9NP98 299 aaPredicted RBP11.53□□□□□ -0.56
PTCH1-215ENST00000547672 GLS2Q9UI32 602 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 ANAPC10Q9UM13 185 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 KCNK7Q9Y2U2 307 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 RTTNQ86VV8 2226 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 AKAP13Q12802 2813 aa11.53□□□□□ -0.56
PTCH1-215ENST00000547672 A0A0A6YYD4 124 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 A0A0G2JNJ9 132 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 UBE2QL1A1L167 161 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 TIMM8AO60220 97 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-215ENST00000547672 PLATP00750 562 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 FCER2P06734 321 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 CELA3BP08861 270 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 CA6P23280 308 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 PSG7Q13046 419 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 RBM39Q14498 530 aaKnown RBP11.52□□□□□ -0.57
PTCH1-215ENST00000547672 IL13RA2Q14627 380 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 GRK1Q15835 563 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 PLAC9Q5JTB6 97 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 VAX1Q5SQQ9 334 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 RGS7BPQ6MZT1 257 aaPredicted RBP11.52□□□□□ -0.57
PTCH1-215ENST00000547672 SEZ6L2Q6UXD5 910 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 TMEM108Q6UXF1 575 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 RNF144BQ7Z419 303 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 BHLHE23Q8NDY6 225 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 OR51S1Q8NGJ8 323 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 OR5H2Q8NGV7 314 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 GTF3AQ92664 365 aaKnown RBP11.52□□□□□ -0.57
PTCH1-215ENST00000547672 SNAPC3Q92966 411 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 C1QTNF6Q9BXI9 259 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 CXXC4Q9H2H0 198 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 OR51B6Q9H340 312 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 OR51I2Q9H344 312 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 JKAMPQ9P055 326 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 Q9UFV3 132 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 PURGQ9UJV8 347 aaKnown RBP11.52□□□□□ -0.57
PTCH1-215ENST00000547672 FREM2Q5SZK8 3169 aa11.52□□□□□ -0.57
PTCH1-215ENST00000547672 A0A0A6YYJ9 748 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 A0A1W2PP11 408 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 MEIS3P1A6NDR6 274 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 H7C1Q1 480 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 M0R1B8 84 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 CREBL2O60519 120 aaPredicted RBP11.51□□□□□ -0.57
PTCH1-215ENST00000547672 AMY2BP19961 511 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 PTAFRP25105 342 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 GLRXP35754 106 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 MAB21L1Q13394 359 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 TAF9Q16594 264 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 SRSF7Q16629 238 aaKnown RBP eCLIP11.51□□□□□ -0.57
PTCH1-215ENST00000547672 CHRFAM7AQ494W8 412 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 SPATA46Q5T0L3 261 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 C11orf88Q6PI97 169 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 IDO2Q6ZQW0 420 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 ZDHHC22Q8N966 263 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 NUDCD2Q8WVJ2 157 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 HPSE2Q8WWQ2 592 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 CMSS1Q9BQ75 279 aaKnown RBP11.51□□□□□ -0.57
PTCH1-215ENST00000547672 ADAT1Q9BUB4 502 aaKnown RBP11.51□□□□□ -0.57
PTCH1-215ENST00000547672 GHITMQ9H3K2 345 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 POFUT1Q9H488 388 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 PRORYQ9H606 182 aa11.51□□□□□ -0.57
PTCH1-215ENST00000547672 MYO7BQ6PIF6 2116 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 INTS1Q8N201 2190 aaKnown RBP11.5□□□□□ -0.57
PTCH1-215ENST00000547672 C1QTNF9BB2RNN3 333 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 MCRIP1C9JLW8 97 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 ARPC1BO15143 372 aaKnown RBP11.5□□□□□ -0.57
PTCH1-215ENST00000547672 SSNA1O43805 119 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 SSX5O60225 188 aa11.5□□□□□ -0.57
PTCH1-215ENST00000547672 RLN1P04808 185 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms