RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 HPXP02790 462 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 UBBP0CG47 229 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 THBS4P35443 961 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 MMP15P51511 669 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 GNG3P63215 75 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 FAM27E3Q08E93 113 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 ZP4Q12836 540 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 PLGLAQ15195 96 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 ZNF385CQ66K41 422 aaPredicted RBP8.85□□□□□ -0.99
TOP3A-208ENST00000542570 ADAM5Q6NVV9 412 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 LHFPL2Q6ZUX7 228 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 ADAMTS9Q9P2N4 1935 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 IGHV3OR15-7A0A075B7D8 119 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 LOC102723996A0A087X1L8 192 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 C5orf63A6NC05 138 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 BPNT1O95861 308 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 OR4E1P0C645 316 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 ST3GAL2Q16842 350 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 OR5T1Q8NG75 326 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 OR10J5Q8NHC4 309 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 FGFBP3Q8TAT2 258 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 C7orf50Q9BRJ6 194 aaKnown RBP8.85□□□□□ -0.99
TOP3A-208ENST00000542570 COL25A1Q9BXS0 654 aaPredicted RBP8.85□□□□□ -0.99
TOP3A-208ENST00000542570 C12orf4Q9NQ89 552 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 ZNF319Q9P2F9 582 aa8.85□□□□□ -0.99
TOP3A-208ENST00000542570 SETD2Q9BYW2 2564 aaPredicted RBP8.84□□□□□ -0.99
TOP3A-208ENST00000542570 PRAF2O60831 178 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 APOC3P02656 99 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 CXCL3P19876 107 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 LY6DQ14210 128 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 C1QL2Q7Z5L3 287 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 PDZD9Q8IXQ8 264 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 LRRC75AQ8NAA5 344 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 HSD17B11Q8NBQ5 300 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 NDRG3Q9UGV2 375 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 HIST1H1DP16402 221 aaKnown RBP8.84□□□□□ -0.99
TOP3A-208ENST00000542570 SERPINF1P36955 418 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 CEBPDP49716 269 aaPredicted RBP8.84□□□□□ -0.99
TOP3A-208ENST00000542570 ACSM1Q08AH1 577 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 SHEQ5VZ18 495 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 ZCCHC24Q8N2G6 241 aaKnown RBP8.84□□□□□ -0.99
TOP3A-208ENST00000542570 CCDC71LQ8N9Z2 235 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 DMBX1Q8NFW5 382 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 ST7LQ8TDW4 575 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 TRIM64A6NGJ6 449 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 LRRC3CA6NJW4 275 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 KCNAB3O43448 404 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 NPIPB7O75200 414 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 CELA3BP08861 270 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 FUT3P21217 361 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 S100A1P23297 94 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 PIGPP57054 158 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 TFAP2EQ6VUC0 442 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 OR11L1Q8NGX0 322 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 WDR89Q96FK6 387 aaPredicted RBP8.84□□□□□ -0.99
TOP3A-208ENST00000542570 ENY2Q9NPA8 101 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 C1orf123Q9NWV4 160 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 MTFP1Q9UDX5 166 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 KIF25Q9UIL4 384 aa8.84□□□□□ -0.99
TOP3A-208ENST00000542570 SSX5O60225 188 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 GSTP1P09211 210 aaKnown RBP8.83□□□□□ -1
TOP3A-208ENST00000542570 BCL3P20749 454 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 NKX6-1P78426 367 aaPredicted RBP8.83□□□□□ -1
TOP3A-208ENST00000542570 AKR1C1Q04828 323 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 GK2Q14410 553 aaPredicted RBP8.83□□□□□ -1
TOP3A-208ENST00000542570 UBE2V2Q15819 145 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 PLEKHN1Q494U1 663 aaPredicted RBP8.83□□□□□ -1
TOP3A-208ENST00000542570 HAS2Q92819 552 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 ZNF436Q9C0F3 470 aaPredicted RBP8.83□□□□□ -1
TOP3A-208ENST00000542570 NECAP2Q9NVZ3 263 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 TAAR3PQ9P1P4 343 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 SH2D1BO14796 132 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 ADAP1O75689 374 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 OR2F2O95006 317 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 HLA-DQB1P01920 261 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 CST2P09228 141 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 ZNF17P17021 662 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 LIMK1P53667 647 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 GGTLC2Q14390 218 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 GPR157Q5UAW9 335 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 CLEC9AQ6UXN8 241 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 BHLHA15Q7RTS1 189 aaPredicted RBP8.83□□□□□ -1
TOP3A-208ENST00000542570 FAM58AQ8N1B3 248 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 MRGPRDQ8TDS7 321 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 LRRC29Q8WV35 223 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 ASF1BQ9NVP2 202 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 UBQLN2Q9UHD9 624 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 ERRFI1Q9UJM3 462 aaPredicted RBP8.83□□□□□ -1
TOP3A-208ENST00000542570 CEBPZOSA8MTT3 80 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 NME2P1O60361 137 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 NME2P22392 152 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 CALCRP30988 508 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 NPBWR2P48146 333 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 ARHGEF39Q8N4T4 335 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 LRRC20Q8TCA0 184 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 ZFAND1Q8TCF1 268 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 RTN4IP1Q8WWV3 396 aaPredicted RBP8.83□□□□□ -1
TOP3A-208ENST00000542570 ARL11Q969Q4 196 aa8.83□□□□□ -1
TOP3A-208ENST00000542570 SLC25A21Q9BQT8 299 aaPredicted RBP8.83□□□□□ -1
TOP3A-208ENST00000542570 PPP1R3EQ9H7J1 279 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms