RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 FAHP16930 419 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 CAV2P51636 162 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 EIF5AP63241 154 aaKnown RBP4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 MRPS34P82930 218 aaKnown RBP4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 CHRFAM7AQ494W8 412 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM27BQ5VT28 67 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 RPUSD3Q6P087 351 aaKnown RBP4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF585AQ6P3V2 769 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 OPN5Q6U736 354 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 DHRS11Q6UWP2 260 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 BTNL8Q6UX41 500 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 PPP1R3BQ86XI6 285 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 C20orf196Q8IYI0 205 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 TMEM105Q8N8V8 129 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 BOLLQ8N9W6 283 aaKnown RBP4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 OR9K2Q8NGE7 335 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 LYPD6BQ8NI32 183 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 SAP25Q8TEE9 199 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 SPSB1Q96BD6 273 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 SGK3Q96BR1 496 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 NARS2Q96I59 477 aaKnown RBP4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF385AQ96PM9 386 aaKnown RBP4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 PIGQQ9BRB3 760 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 NAA11Q9BSU3 229 aaPredicted RBP4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF700Q9H0M5 742 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 TLNRD1Q9H1K6 362 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 ARV1Q9H2C2 271 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 METTL8Q9H825 291 aaKnown RBP4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 AKIRIN1Q9H9L7 192 aaPredicted RBP4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 UQCC1Q9NVA1 299 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 C1orf123Q9NWV4 160 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 RCC2Q9P258 522 aaKnown RBP4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 NXT1Q9UKK6 140 aaKnown RBP4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 HSF4Q9ULV5 492 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 EDARQ9UNE0 448 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 MEMO1Q9Y316 297 aa4.53□□□□□ -1.69
ATPAF1-212ENST00000542495 NCOA6Q14686 2063 aaPredicted RBP4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 CACNA1HO95180 2353 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF705EA8MWA4 302 aaPredicted RBP4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 FAM157AC9JC47 383 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 F5H5K5 113 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 M0R135 149 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 DNPH1O43598 174 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 SYNGR3O43761 229 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 MTRF1O75570 445 aaKnown RBP4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 DEDDO75618 318 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 SNAPINO95295 136 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 CST4P01036 141 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 CD5P06127 495 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 UMODP07911 640 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 FCGR3AP08637 254 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 HOXB5P09067 269 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 CCL3P10147 92 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 COX6A1P12074 109 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 SERPINA2P20848 420 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 DTYMKP23919 212 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 GUCA1AP43080 201 aaPredicted RBP4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 LPAR6P43657 344 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 SULT1A2P50226 295 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 AKR1C2P52895 323 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 DSCR4P56555 118 aaPredicted RBP4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 AKR1C1Q04828 323 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 IL11RAQ14626 422 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 SNAI3Q3KNW1 292 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 PRAMEF20Q5VT98 475 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 TMEM42Q69YG0 159 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 RPL7L1Q6DKI1 246 aaKnown RBP4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 EIF5AL1Q6IS14 154 aaKnown RBP4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 ASCL5Q7RTU5 278 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 C6orf201Q7Z4U5 140 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 IQCF2Q8IXL9 164 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 DMRTC2Q8IXT2 367 aaPredicted RBP4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 LINC00518Q8N0U6 118 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 SPAG16Q8N0X2 631 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 LRTM2Q8N967 370 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 DMBX1Q8NFW5 382 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 SEMA6DQ8NFY4 1073 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 OR5D18Q8NGL1 313 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 M1APQ8TC57 530 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 NPRL2Q8WTW4 380 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 MAFIPQ8WZ33 124 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 SPTSSAQ969W0 71 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 FBXO17Q96EF6 278 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 GALNT14Q96FL9 552 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 ZNF799Q96GE5 643 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 NRIP2Q9BQI9 281 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 SF3B5Q9BWJ5 86 aaKnown RBP4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 LIME1Q9H400 295 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 GSX1Q9H4S2 264 aaPredicted RBP4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 RHOFQ9HBH0 211 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 PARP11Q9NR21 331 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 HPF1Q9NWY4 346 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 OCIAD1Q9NX40 245 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 ANXA10Q9UJ72 324 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 C14orf166Q9Y224 244 aaKnown RBP4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 PIGLQ9Y2B2 252 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 AMDHD2Q9Y303 409 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 POMT1Q9Y6A1 747 aa4.52□□□□□ -1.69
ATPAF1-212ENST00000542495 PTPRZ1P23471 2315 aaPredicted RBP4.51□□□□□ -1.69
ATPAF1-212ENST00000542495 CFAP54Q96N23 3096 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms