RNA–Protein interactions for RNA: ENST00000542112.5

SNHG1-219, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 780 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-219ENST00000542112 P2RX2Q9UBL9 471 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 MCM3APO60318 1980 aa3.82□□□□□ -1.8
SNHG1-219ENST00000542112 IGHV2-26A0A0B4J1V2 119 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 IGKV6D-41A0A0C4DH26 115 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 TMEM272A0A1B0GTI8 110 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 IGLC7A0M8Q6 106 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 C2CD4BA6NLJ0 364 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 OR2AG2A6NM03 316 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 K7EQM0 130 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 PIRO00625 290 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 CD5LO43866 347 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 FCMRO60667 390 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 DUSP11O75319 330 aaKnown RBP3.81□□□□□ -1.8
SNHG1-219ENST00000542112 SCGB2A1O75556 95 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 CNMDO75829 334 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 TMEM50AO95807 157 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 TXNDC12O95881 172 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 IGHG3P01860 377 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 HBE1P02100 147 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 MBPP02686 304 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-219ENST00000542112 CXCL1P09341 107 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 LIMS3P0CW19 117 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 LIMS4P0CW20 117 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 PGA4P0DJD7 388 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 PGA5P0DJD9 388 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 TCN2P20062 427 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 AZU1P20160 251 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 OMGP23515 440 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 CFPP27918 469 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 NMBRP28336 390 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 S100A7P31151 101 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 CTRLP40313 264 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 PTH2RP49190 550 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 GPM6AP51674 278 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 MVDP53602 400 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 RRADP55042 308 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 OR12D2P58182 307 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 MLF1P58340 268 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 S100A10P60903 97 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 ADAM8P78325 824 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 TLE3Q04726 772 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 PPP1R8Q12972 351 aaKnown RBP3.81□□□□□ -1.8
SNHG1-219ENST00000542112 GINS1Q14691 196 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 PAFAH1B3Q15102 231 aaKnown RBP3.81□□□□□ -1.8
SNHG1-219ENST00000542112 RAB30Q15771 203 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 BATFQ16520 125 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 FAM174BQ3ZCQ3 159 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF585BQ52M93 769 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 PDZD11Q5EBL8 140 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 CRB2Q5IJ48 1285 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF648Q5T619 568 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-219ENST00000542112 SLC8B1Q6J4K2 584 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 NIPAL3Q6P499 406 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF322Q6U7Q0 402 aaPredicted RBP3.81□□□□□ -1.8
SNHG1-219ENST00000542112 TTLL10Q6ZVT0 673 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 PARS2Q7L3T8 475 aaKnown RBP3.81□□□□□ -1.8
SNHG1-219ENST00000542112 FA2HQ7L5A8 372 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 NEGR1Q7Z3B1 354 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 DOLPP1Q86YN1 238 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF101Q8IZC7 436 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 OR2C3Q8N628 320 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 STPG4Q8N801 248 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 BOLLQ8N9W6 283 aaKnown RBP3.81□□□□□ -1.8
SNHG1-219ENST00000542112 LINC01356Q8N9X3 169 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 TMEM229BQ8NBD8 167 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 OR2Y1Q8NGV0 311 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 OR2T27Q8NH04 317 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 OR4L1Q8NH43 312 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 OR52E5Q8NH55 327 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 OR52I2Q8NH67 350 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 MFSD8Q8NHS3 518 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 DCUN1D4Q92564 292 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 NDRG1Q92597 394 aaKnown RBP3.81□□□□□ -1.8
SNHG1-219ENST00000542112 FGF11Q92914 225 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 PTX4Q96A99 478 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 ATXN7L3BQ96GX2 97 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 SLC35G5Q96KT7 338 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 GPR82Q96P67 336 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 P2RX4Q99571 388 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 MRPL45Q9BRJ2 306 aaKnown RBP3.81□□□□□ -1.8
SNHG1-219ENST00000542112 ZNF649Q9BS31 505 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 TIMM29Q9BSF4 260 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 CABLES2Q9BTV7 478 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 ABHD6Q9BV23 337 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 RTN4RQ9BZR6 473 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 FZD8Q9H461 694 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 ZDHHC11Q9H8X9 412 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 RPF1Q9H9Y2 349 aaKnown RBP3.81□□□□□ -1.8
SNHG1-219ENST00000542112 Q9N2K0 584 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 LRIT1Q9P2V4 623 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 MRM2Q9UI43 246 aaKnown RBP3.81□□□□□ -1.8
SNHG1-219ENST00000542112 SCML2Q9UQR0 700 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 STYXL1Q9Y6J8 313 aa3.81□□□□□ -1.8
SNHG1-219ENST00000542112 TRPM7Q96QT4 1865 aa3.8□□□□□ -1.8
SNHG1-219ENST00000542112 TRAV9-1A0A075B6T8 112 aa3.8□□□□□ -1.8
SNHG1-219ENST00000542112 A0A0J9YY10 115 aa3.8□□□□□ -1.8
SNHG1-219ENST00000542112 CENPVL1A0A0U1RR11 272 aa3.8□□□□□ -1.8
SNHG1-219ENST00000542112 A0A1B0GU03 582 aa3.8□□□□□ -1.8
SNHG1-219ENST00000542112 A0A1B0GX78 115 aa3.8□□□□□ -1.8
SNHG1-219ENST00000542112 A0A1W2PR80 420 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms