RNA–Protein interactions for RNA: ENST00000541576.5

THBS3-210, Transcript of thrombospondin 3, humanhuman

TSL 1 (best) BASIC

Gene THBS3, Length 3,200 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-210ENST00000541576 SHANK1Q9Y566 2161 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 IGKV1-9A0A0C4DH69 117 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 OR5H1A6NKK0 313 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 EEF1E1-BLOC1S5C9J1V9 151 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 GOSR2O14653 212 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 BET1O15155 118 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 NDUFS6O75380 124 aaKnown RBP7.5□□□□□ -1.21
THBS3-210ENST00000541576 NGFP01138 241 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 EFNB2P52799 333 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 FGL1Q08830 312 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 MRPL49Q13405 166 aaKnown RBP7.5□□□□□ -1.21
THBS3-210ENST00000541576 C2orf76Q3KRA6 126 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 BIVMQ86UB2 503 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 MYPOPQ86VE0 399 aaPredicted RBP7.5□□□□□ -1.21
THBS3-210ENST00000541576 ZNF101Q8IZC7 436 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 OR4D6Q8NGJ1 314 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 OR10K1Q8NGX5 313 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 FAM3DQ96BQ1 224 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 SPACA5Q96QH8 159 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 REG4Q9BYZ8 158 aa7.5□□□□□ -1.21
THBS3-210ENST00000541576 TINAGL1Q9GZM7 467 aaPredicted RBP7.5□□□□□ -1.21
THBS3-210ENST00000541576 A8MXE2 369 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 AGFG2O95081 481 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 IGKV3-15P01624 115 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 HCKP08631 526 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 PTBP1P26599 531 aaKnown RBP eCLIP7.49□□□□□ -1.21
THBS3-210ENST00000541576 ZNF93P35789 620 aaPredicted RBP7.49□□□□□ -1.21
THBS3-210ENST00000541576 WNT5AP41221 380 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 AKR1C3P42330 323 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 POU3F4P49335 361 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 CASP6P55212 293 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 HLXQ14774 488 aaPredicted RBP7.49□□□□□ -1.21
THBS3-210ENST00000541576 OR8B8Q15620 311 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 C1orf100Q5SVJ3 147 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 TMED4Q7Z7H5 227 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 ST6GALNAC3Q8NDV1 305 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 OR52I2Q8NH67 350 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 SYNPRQ8TBG9 265 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 CNTD2Q9H8S5 307 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 CDH20Q9HBT6 801 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 STARD10Q9Y365 291 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 TRGV8A0A0C4DH27 118 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 LOC100289279A0A1B0GTE1 492 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 C7orf66A4D0T2 115 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 KRBOX1C9JBD0 128 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 HLA-DQB1P01920 261 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 SULT1A3P0DMM9 295 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 SULT1A4P0DMN0 295 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 PVALBP20472 110 aaPredicted RBP7.49□□□□□ -1.21
THBS3-210ENST00000541576 ART1P52961 327 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 GK2Q14410 553 aaPredicted RBP7.49□□□□□ -1.21
THBS3-210ENST00000541576 C2orf68Q2NKX9 166 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 PYHIN1Q6K0P9 492 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 RGS7BPQ6MZT1 257 aaPredicted RBP7.49□□□□□ -1.21
THBS3-210ENST00000541576 TMUB2Q71RG4 321 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 MRPL21Q7Z2W9 205 aaKnown RBP7.49□□□□□ -1.21
THBS3-210ENST00000541576 BVESQ8NE79 360 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 VKORC1Q9BQB6 163 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 REPIN1Q9BWE0 567 aaKnown RBP7.49□□□□□ -1.21
THBS3-210ENST00000541576 ACTR6Q9GZN1 396 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 MYEF2Q9P2K5 600 aaKnown RBP7.49□□□□□ -1.21
THBS3-210ENST00000541576 AMDHD2Q9Y303 409 aa7.49□□□□□ -1.21
THBS3-210ENST00000541576 PRSS44E7EML9 344 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 NDUFA2O43678 99 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 PSMB1P20618 241 aaKnown RBP7.48□□□□□ -1.21
THBS3-210ENST00000541576 UBE2V2Q15819 145 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 NHLRC3Q5JS37 347 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 OR10K2Q6IF99 312 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 GSG1LQ6UXU4 331 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 MRGPRGQ86SM5 289 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 FAM219AQ8IW50 185 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 CDH26Q8IXH8 852 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 OR5L1Q8NGL2 311 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 NPRL2Q8WTW4 380 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 S100PBPQ96BU1 408 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 NKX6-2Q9C056 277 aaPredicted RBP7.48□□□□□ -1.21
THBS3-210ENST00000541576 OR51B6Q9H340 312 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 OPA3Q9H6K4 179 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 ESRP2Q9H6T0 727 aaKnown RBP7.48□□□□□ -1.21
THBS3-210ENST00000541576 PTTG3PQ9NZH4 202 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 KALRNO60229 2985 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 TMEM272A0A1B0GTI8 110 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 J3QW42 95 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 DNASE2O00115 360 aaPredicted RBP7.48□□□□□ -1.21
THBS3-210ENST00000541576 S100A11P31949 105 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 CAPZA1P52907 286 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 C4orf46Q504U0 113 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 TIMM23BQ5SRD1 257 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 TMEM211Q6ICI0 200 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 CRIP3Q6Q6R5 217 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 BPIFCQ8NFQ6 507 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 OR56B4Q8NH76 319 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 RAB40AQ8WXH6 277 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 RND1Q92730 232 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 DVL3Q92997 716 aaPredicted RBP7.48□□□□□ -1.21
THBS3-210ENST00000541576 S100A16Q96FQ6 103 aaKnown RBP7.48□□□□□ -1.21
THBS3-210ENST00000541576 GPER1Q99527 375 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 ZNF471Q9BX82 626 aaPredicted RBP7.48□□□□□ -1.21
THBS3-210ENST00000541576 MFFQ9GZY8 342 aa7.48□□□□□ -1.21
THBS3-210ENST00000541576 GPR173Q9NS66 373 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms