RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 A0A0C4DFX4 3053 aa12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 NCOA6Q14686 2063 aaPredicted RBP12.7□□□□□ -0.38
SPOCK3-226ENST00000541354 A0A1B0GW55 424 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 MKRN2OSH3BPM6 223 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 PMP2P02689 132 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 DUX4L2P0CJ85 424 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 DUX4L3P0CJ86 424 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 DUX4L4P0CJ87 422 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 DUX4L5P0CJ88 424 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 DUX4L6P0CJ89 424 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 DUX4L7P0CJ90 424 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 FPR2P25090 351 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 ASCL4Q6XD76 172 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 LHFPL2Q6ZUX7 228 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 RTN4RL2Q86UN3 420 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 SHARPINQ9H0F6 387 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 OBP2BQ9NPH6 170 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 PCDHB16Q9NRJ7 776 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 DUX4Q9UBX2 424 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 OSGIN2Q9Y236 505 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 CSAG2Q9Y5P2 127 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 C5orf63A6NC05 138 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 SERPINE3A8MV23 424 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 BET1O15155 118 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 RLN2P04090 185 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 LCATP04180 440 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 LYL1P12980 280 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 SURF2Q15527 256 aaPredicted RBP12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 UBE2V2Q15819 145 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 C17orf78Q8N4C9 275 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 ARHGAP5-AS1Q96IT6 56 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 GLS2Q9UI32 602 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 PIGLQ9Y2B2 252 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 WDR87Q6ZQQ6 2873 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 KANTRA0A1W2PQU2 76 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 SFT2D2O95562 160 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 TAS2R46P59540 309 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 GFOD2Q3B7J2 385 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 TFAP2EQ6VUC0 442 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 MARCH1Q8TCQ1 289 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 TMEM230Q96A57 120 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 PDCD10Q9BUL8 212 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 PPA2Q9H2U2 334 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 BANF2Q9H503 90 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 C5orf66Q9H5L9 145 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 RAB18Q9NP72 206 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 IL36GQ9NZH8 169 aa12.69□□□□□ -0.38
SPOCK3-226ENST00000541354 MBD3L4A6NDZ8 208 aaPredicted RBP12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 MBD3L3A6NE82 208 aaPredicted RBP12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 MBD3L5A6NJ08 208 aaPredicted RBP12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 WDR1O75083 606 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 CRTAPO75718 401 aaPredicted RBP12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 ATP1B3P54709 279 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 UCNP55089 124 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 SNAI3Q3KNW1 292 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 Q6ZT83 130 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 CSNK2A3Q8NEV1 391 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 AKR7LQ8NHP1 331 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 MBD3L2Q8NHZ7 208 aaPredicted RBP12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 LINC00052Q96N35 136 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 GPER1Q99527 375 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 WDR13Q9H1Z4 485 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 BARX1Q9HBU1 254 aaPredicted RBP12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 TMA7Q9Y2S6 64 aaKnown RBP12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 ARHGAP21Q5T5U3 1957 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 ZNF816-ZNF321PA0A0X1KG74 233 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 A0A1W2PP11 408 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 PRSS44E7EML9 344 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 RRP8O43159 456 aaKnown RBP12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 DBHP09172 617 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 COX5AP20674 150 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 NUP62P37198 522 aaPredicted RBP12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 MALLQ13021 153 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 ACSF3Q4G176 576 aaPredicted RBP12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 TMEM17Q86X19 198 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 C1orf174Q8IYL3 243 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 FAM169BQ8N8A8 192 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 FGFBP3Q8TAT2 258 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 VRK1Q99986 396 aaPredicted RBP12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 PECRQ9BY49 303 aa12.68□□□□□ -0.38
SPOCK3-226ENST00000541354 LOC105371267A0A1B0GV96 52 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 F8VVB4 439 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 F8VWA3 439 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 CCSO14618 274 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 IL18BPO95998 194 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 PSMB6P28072 239 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 PMP22Q01453 160 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 INO80CQ6PI98 192 aaPredicted RBP12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 C1QL2Q7Z5L3 287 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 PXT1Q8NFP0 134 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 OR5L1Q8NGL2 311 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 OR5H2Q8NGV7 314 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 STOML3Q8TAV4 291 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 THAP6Q8TBB0 222 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 MRPS24Q96EL2 167 aaKnown RBP12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 CCDC120Q96HB5 630 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 POM121L2Q96KW2 1035 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 PLSCR4Q9NRQ2 329 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 SPDEFO95238 335 aa12.67□□□□□ -0.38
SPOCK3-226ENST00000541354 CST4P01036 141 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms