RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 CD177Q8N6Q3 437 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 OR13C2Q8NGS9 318 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 ARPC1AQ92747 370 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 ITFG2Q969R8 447 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 UTP4Q969X6 686 aaKnown RBP7.3□□□□□ -1.24
YBX3-211ENST00000541351 GPX7Q96SL4 187 aaPredicted RBP7.3□□□□□ -1.24
YBX3-211ENST00000541351 RSRP1Q9BUV0 290 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 GAL3ST2Q9H3Q3 398 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 SRA1Q9HD15 236 aaKnown RBP7.3□□□□□ -1.24
YBX3-211ENST00000541351 NRIP3Q9NQ35 241 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 SLC25A37Q9NYZ2 338 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 SIGLEC8Q9NYZ4 499 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 OR14J1Q9UGF5 321 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 B9D1Q9UPM9 204 aa7.3□□□□□ -1.24
YBX3-211ENST00000541351 FAM90A18PA6NE21 464 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 FAM90A16PA6NEW6 464 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 FAM90A20PA6NIJ5 464 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 OR5B21A6NL26 309 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 FAM90A9PA6NNJ1 464 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 FAM90A12PA8MX19 464 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 FAM90A5PA8MXJ8 464 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 ZNF878C9JN71 531 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 BUB1B-PAK6H3BSN5 160 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 UBDO15205 165 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 BIRC5O15392 142 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 MPZL2O60487 215 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 BRI3O95415 125 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 IGLV1-51P01701 117 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 SPARCP09486 303 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 FAM90A15PP0C7V4 464 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 FAM90A13PP0C7W8 464 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 FAM90A14PP0C7W9 464 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 FAM90A24PP0C7X0 464 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 SLC2A1P11166 492 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 HOXB9P17482 250 aaPredicted RBP7.29□□□□□ -1.24
YBX3-211ENST00000541351 TCTAP57738 103 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 IFFO1Q0D2I5 559 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 HLA-DRB5Q30154 266 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 LCN1P1Q5VSP4 162 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 LCN12Q6JVE5 192 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 ZNF730Q6ZMV8 503 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 DPY19L2P2Q6ZN68 376 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 TRAPPC6BQ86SZ2 158 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 TGIF2LXQ8IUE1 241 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 IFT20Q8IY31 132 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 TMEM217Q8N7C4 229 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 POC1AQ8NBT0 407 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 PIGCQ92535 297 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 DLX4Q92988 240 aaPredicted RBP7.29□□□□□ -1.24
YBX3-211ENST00000541351 TOMM40LQ969M1 308 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 FLYWCH2Q96CP2 140 aaKnown RBP7.29□□□□□ -1.24
YBX3-211ENST00000541351 PRRC1Q96M27 445 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 ABCG5Q9H222 651 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 KRT84Q9NSB2 600 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 ING3Q9NXR8 418 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 VAPAQ9P0L0 249 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 MRM2Q9UI43 246 aaKnown RBP7.29□□□□□ -1.24
YBX3-211ENST00000541351 ZNF580Q9UK33 172 aa7.29□□□□□ -1.24
YBX3-211ENST00000541351 NCBP2LA6PVI3 153 aaKnown RBP7.28□□□□□ -1.24
YBX3-211ENST00000541351 ZNF732B4DXR9 585 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 SPAG7O75391 227 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 TXNDC12O95881 172 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 IGLV1-47P01700 117 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 ATF4P18848 351 aaPredicted RBP7.28□□□□□ -1.24
YBX3-211ENST00000541351 GPR4P46093 362 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 RBM39Q14498 530 aaKnown RBP7.28□□□□□ -1.24
YBX3-211ENST00000541351 KPNB1Q14974 876 aaKnown RBP7.28□□□□□ -1.24
YBX3-211ENST00000541351 TRAM2Q15035 370 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 GFOD2Q3B7J2 385 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 PTCHD4Q6ZW05 846 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 OR8H3Q8N146 312 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 OR8H2Q8N162 312 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 ZNF491Q8N8L2 437 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 OR56B4Q8NH76 319 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 MYOZ3Q8TDC0 251 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 UBLCP1Q8WVY7 318 aaPredicted RBP7.28□□□□□ -1.24
YBX3-211ENST00000541351 AQP3Q92482 292 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 TMEM106AQ96A25 262 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 TAMM41Q96BW9 452 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 TSSK2Q96PF2 358 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 OR8B4Q96RC9 309 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 RASL11BQ9BPW5 248 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 FNDC11Q9BVV2 318 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 OR51I2Q9H344 312 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 NIPAL2Q9H841 368 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 BATF3Q9NR55 127 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 CENPMQ9NSP4 180 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 KIAA1456Q9P272 454 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 ENPP5Q9UJA9 477 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 SLC22A13Q9Y226 551 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 UBE2J1Q9Y385 318 aaPredicted RBP7.28□□□□□ -1.24
YBX3-211ENST00000541351 IER3IP1Q9Y5U9 82 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 WSB1Q9Y6I7 421 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 DNAH10Q8IVF4 4471 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 ABCA13Q86UQ4 5058 aa7.28□□□□□ -1.24
YBX3-211ENST00000541351 A0A1B0GVY2 172 aa7.27□□□□□ -1.25
YBX3-211ENST00000541351 FUOMA2VDF0 154 aa7.27□□□□□ -1.25
YBX3-211ENST00000541351 PRSS29PA6NIE9 313 aa7.27□□□□□ -1.25
YBX3-211ENST00000541351 TPPPO94811 219 aa7.27□□□□□ -1.25
YBX3-211ENST00000541351 PEX2P28328 305 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms