RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 FAM201AQ5SY85 155 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 CD276Q5ZPR3 534 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 ACP7Q6ZNF0 438 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 DEFB108BQ8NET1 73 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 DMRTB1Q96MA1 342 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 NR1H4Q96RI1 486 aaPredicted RBP15.69■□□□□ 0.1
VPS33A-205ENST00000541169 TMED9Q9BVK6 235 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 SSBP3Q9BWW4 388 aaPredicted RBP15.69■□□□□ 0.1
VPS33A-205ENST00000541169 SLITRK2Q9H156 845 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 TAS2R4Q9NYW5 299 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 CLN8Q9UBY8 286 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 KCNS2Q9ULS6 477 aa15.69■□□□□ 0.1
VPS33A-205ENST00000541169 ACANP16112 2415 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 A8MV72 311 aaPredicted RBP15.68■□□□□ 0.1
VPS33A-205ENST00000541169 CCRL2O00421 344 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 SYNGR1O43759 233 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 ZNF205O95201 554 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 ECDO95905 644 aaPredicted RBP15.68■□□□□ 0.1
VPS33A-205ENST00000541169 KNG1P01042 644 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 EGR1P18146 543 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 PITPNBP48739 271 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 GNB2P62879 340 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 STUMQ69YW2 141 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 PXT1Q8NFP0 134 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 OR13C5Q8NGS8 318 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 FOXRED1Q96CU9 486 aaPredicted RBP15.68■□□□□ 0.1
VPS33A-205ENST00000541169 GPER1Q99527 375 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 ZNF696Q9H7X3 374 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 TCF7L1Q9HCS4 588 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 NDUFB11Q9NX14 153 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 OR5V1Q9UGF6 321 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 GLS2Q9UI32 602 aa15.68■□□□□ 0.1
VPS33A-205ENST00000541169 J3QLI3 93 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 TMPRSS2O15393 492 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 ADAM20O43506 726 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 RGS9O75916 674 aaPredicted RBP15.67■□□□□ 0.1
VPS33A-205ENST00000541169 TMEM225BP0DP42 221 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 ZNF93P35789 620 aaPredicted RBP15.67■□□□□ 0.1
VPS33A-205ENST00000541169 POU3F4P49335 361 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 IL13RA1P78552 427 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 KRTAP1-1Q07627 177 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 SPIN3Q5JUX0 258 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 CEACAM19Q7Z692 300 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 TSPAN14Q8NG11 270 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 ANGPTL6Q8NI99 470 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 TMEM186Q96B77 213 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 S100A13Q99584 98 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 WDR13Q9H1Z4 485 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 SMURF1Q9HCE7 757 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 MTCH1Q9NZJ7 389 aa15.67■□□□□ 0.1
VPS33A-205ENST00000541169 A0A0G2JMP0 313 aa15.66■□□□□ 0.1
VPS33A-205ENST00000541169 A0A0X1KG70 313 aa15.66■□□□□ 0.1
VPS33A-205ENST00000541169 FAM157AC9JC47 383 aa15.66■□□□□ 0.1
VPS33A-205ENST00000541169 NDUFB3O43676 98 aa15.66■□□□□ 0.1
VPS33A-205ENST00000541169 ZNF780AO75290 641 aaPredicted RBP15.66■□□□□ 0.1
VPS33A-205ENST00000541169 KDM4BO94953 1096 aa15.66■□□□□ 0.1
VPS33A-205ENST00000541169 GYPAP02724 150 aa15.66■□□□□ 0.1
VPS33A-205ENST00000541169 UCHL1P09936 223 aa15.66■□□□□ 0.1
VPS33A-205ENST00000541169 GPR176Q14439 515 aa15.66■□□□□ 0.1
VPS33A-205ENST00000541169 LRRC10Q5BKY1 277 aa15.66■□□□□ 0.1
VPS33A-205ENST00000541169 DDI2Q5TDH0 399 aa15.66■□□□□ 0.1
VPS33A-205ENST00000541169 ZNF561Q8N587 486 aa15.66■□□□□ 0.1
VPS33A-205ENST00000541169 OR4M2Q8NGB6 313 aa15.66■□□□□ 0.1
VPS33A-205ENST00000541169 UQCC2Q9BRT2 126 aa15.66■□□□□ 0.1
VPS33A-205ENST00000541169 NOX4Q9NPH5 578 aa15.66■□□□□ 0.1
VPS33A-205ENST00000541169 SF3B6Q9Y3B4 125 aaKnown RBP15.66■□□□□ 0.1
VPS33A-205ENST00000541169 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP15.66■□□□□ 0.14e-9■■■■■ 34.1
VPS33A-205ENST00000541169 ABCA1O95477 2261 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 LIPFP07098 398 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 ZNF16P17020 682 aaPredicted RBP15.65■□□□□ 0.1
VPS33A-205ENST00000541169 SRMP19623 302 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 HNF1AP20823 631 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 PSMB9P28065 219 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 PTGFRP43088 359 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 MTNR1BP49286 362 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 PSMD7P51665 324 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 ZP1P60852 638 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 HSD17B12Q53GQ0 312 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 SYT6Q5T7P8 510 aaPredicted RBP15.65■□□□□ 0.1
VPS33A-205ENST00000541169 ELP2Q6IA86 826 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 ASPHD2Q6ICH7 369 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 CD200R1LQ6Q8B3 271 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 ZNF788Q6ZQV5 615 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 SATL1Q86VE3 508 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 FAM58AQ8N1B3 248 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 OR52N4Q8NGI2 321 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 SLAMF9Q96A28 289 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 SDSLQ96GA7 329 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 SMR3AQ99954 134 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 FAM234AQ9H0X4 552 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 YAE1D1Q9NRH1 226 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 HIF1ANQ9NWT6 349 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 LPAR3Q9UBY5 353 aa15.65■□□□□ 0.1
VPS33A-205ENST00000541169 IGHV3OR15-7A0A075B7D8 119 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 SIGLEC5O15389 551 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 PLATP00750 562 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 PSG2P11465 335 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 CAV3P56539 151 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 ZNF146Q15072 292 aa15.64■□□□□ 0.09
VPS33A-205ENST00000541169 WDR25Q64LD2 544 aaPredicted RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms