RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 IGHV1-8P0DP01 117 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 PSG2P11465 335 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 CCL3L1P16619 93 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 OTX1P32242 354 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-214ENST00000540865 OR3A4PP47883 348 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 CENPAP49450 140 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 SLC7A2P52569 658 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 CAPZA1P52907 286 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 CRYBA2P53672 197 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 DLX6P56179 175 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 RAB25P57735 213 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 GMFBP60983 142 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 STX1BP61266 288 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 PRKCDQ05655 676 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 SLC34A1Q06495 639 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 IL18R1Q13478 541 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 KIR2DS1Q14954 304 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 SNCBQ16143 134 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 ZBED5Q49AG3 693 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 FAM76BQ5HYJ3 339 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 FAM27D1Q5T7N8 215 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 LCN8Q6JVE9 175 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 DLEU7Q6UYE1 221 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 ZNF782Q6ZMW2 699 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-214ENST00000540865 C18orf65Q6ZTR6 163 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 PTCHD4Q6ZW05 846 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 TMPRSS11FQ6ZWK6 438 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 DHDDSQ86SQ9 333 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 ZNF329Q86UD4 541 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 SATL1Q86VE3 508 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 EGFL6Q8IUX8 553 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 LINC00346Q8IVM7 164 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 FUNDC1Q8IVP5 155 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 NRMQ8IXM6 262 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 RNF113BQ8IZP6 322 aaKnown RBP3.61□□□□□ -1.83
SNHG1-214ENST00000540865 OR13C2Q8NGS9 318 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 OR8U1Q8NH10 309 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 CHPT1Q8WUD6 406 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 RFKQ969G6 155 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 RBM14Q96PK6 669 aaKnown RBP3.61□□□□□ -1.83
SNHG1-214ENST00000540865 OR52B2Q96RD2 323 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 GPX7Q96SL4 187 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-214ENST00000540865 RTL8AQ9BWD3 113 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 ABCB9Q9NP78 766 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 NRIP3Q9NQ35 241 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 THAP1Q9NVV9 213 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 KCNG2Q9UJ96 466 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 ZNF222Q9UK12 451 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 B9D1Q9UPM9 204 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 HILPDAQ9Y5L2 63 aa3.61□□□□□ -1.83
SNHG1-214ENST00000540865 SIRT4Q9Y6E7 314 aaPredicted RBP3.61□□□□□ -1.83
SNHG1-214ENST00000540865 LOC102723971A0A1B0GUV8 181 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 ANXA2P2A6NMY6 339 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 DCTN6O00399 190 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 SOCS2O14508 198 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 CDC42EP2O14613 210 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 RGS10O43665 173 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 SLC25A17O43808 307 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 RRP9O43818 475 aaKnown RBP3.6□□□□□ -1.83
SNHG1-214ENST00000540865 SNNO75324 88 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-214ENST00000540865 MTRF1O75570 445 aaKnown RBP3.6□□□□□ -1.83
SNHG1-214ENST00000540865 NDUFB2O95178 105 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 IFNA14P01570 189 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 SNRNP70P08621 437 aaKnown RBP3.6□□□□□ -1.83
SNHG1-214ENST00000540865 HCKP08631 526 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 IL6RP08887 468 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-214ENST00000540865 BTF3P20290 206 aaKnown RBP3.6□□□□□ -1.83
SNHG1-214ENST00000540865 TNFRSF1BP20333 461 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 ANOS1P23352 680 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 GLRA1P23415 457 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 CFL1P23528 166 aaKnown RBP3.6□□□□□ -1.83
SNHG1-214ENST00000540865 BRS3P32247 399 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 CDKN2AP42771 156 aaKnown RBP3.6□□□□□ -1.83
SNHG1-214ENST00000540865 RPS6KA3P51812 740 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 ARHGDIBP52566 201 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 SLC35B1P78383 322 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 FAM3AP98173 230 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 IFFO1Q0D2I5 559 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 DYNC1I2Q13409 638 aaKnown RBP3.6□□□□□ -1.83
SNHG1-214ENST00000540865 ZNF273Q14593 569 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 KRT72Q14CN4 511 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 TRAM2Q15035 370 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 ZNF260Q3ZCT1 412 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 C9orf152Q5JTZ5 239 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 AGBL2Q5U5Z8 902 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 DPY19L2P2Q6ZN68 376 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 ZBTB49Q6ZSB9 765 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 MBOAT2Q6ZWT7 520 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 SLC16A9Q7RTY1 509 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 SPARTQ8N0X7 666 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 OR6V1Q8N148 313 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 C17orf53Q8N3J3 647 aaPredicted RBP3.6□□□□□ -1.83
SNHG1-214ENST00000540865 FTMTQ8N4E7 242 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 ZNF561Q8N587 486 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 DPP10Q8N608 796 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 RNF152Q8N8N0 203 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 CSNK2A3Q8NEV1 391 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 OR4C15Q8NGM1 316 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 OR2T27Q8NH04 317 aa3.6□□□□□ -1.83
SNHG1-214ENST00000540865 OR4Q3Q8NH05 313 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms