RNA–Protein interactions for RNA: ENST00000540669.1

VPS33A-204, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS33A, Length 455 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-204ENST00000540669 CCL8P80075 99 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 MXD1Q05195 221 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 HNRNPA0Q13151 305 aaKnown RBP8.87□□□□□ -0.99
VPS33A-204ENST00000540669 TEX36Q5VZQ5 186 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 HAGHLQ6PII5 290 aaPredicted RBP8.87□□□□□ -0.99
VPS33A-204ENST00000540669 ZNF826PQ6ZT77 177 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 OR2W3Q7Z3T1 314 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 ANGPTL5Q86XS5 388 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 FAM90A1Q86YD7 464 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 KRTAP1-3Q8IUG1 177 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 NRGNQ92686 78 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 RFT1Q96AA3 541 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 SLC25A38Q96DW6 304 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 POM121Q96HA1 1249 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 MRI1Q9BV20 369 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 DCAF16Q9NXF7 216 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 OR5V1Q9UGF6 321 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 STEAP1Q9UHE8 339 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 ZNF222Q9UK12 451 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 POLDIP2Q9Y2S7 368 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 CACNG2Q9Y698 323 aa8.87□□□□□ -0.99
VPS33A-204ENST00000540669 DSCAML1Q8TD84 2053 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 SMIM30A4D0T7 59 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 TMEM178BH3BS89 294 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 CDIPTO14735 213 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 TNFRSF13BO14836 293 aaPredicted RBP8.86□□□□□ -0.99
VPS33A-204ENST00000540669 SPRY1O43609 319 aaPredicted RBP8.86□□□□□ -0.99
VPS33A-204ENST00000540669 ANGPTL7O43827 346 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 NOL3O60936 208 aaKnown RBP8.86□□□□□ -0.99
VPS33A-204ENST00000540669 F12P00748 615 aaPredicted RBP8.86□□□□□ -0.99
VPS33A-204ENST00000540669 SFTPBP07988 381 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 GIFP27352 417 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 NPBWR2P48146 333 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 EFNA4P52798 201 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 FGF12P61328 243 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 RAB11BQ15907 218 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 SLC25A26Q70HW3 274 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 MOGAT3Q86VF5 341 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 Q8IYB0 196 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 LRRC75A-AS1Q8N1F1 130 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 FAM89BQ8N5H3 189 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 JAGN1Q8N5M9 183 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 TMEM104Q8NE00 496 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 OR5D18Q8NGL1 313 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 LGALS14Q8TCE9 139 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 TNFAIP8L1Q8WVP5 186 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 FAM3DQ96BQ1 224 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 MRPS24Q96EL2 167 aaKnown RBP8.86□□□□□ -0.99
VPS33A-204ENST00000540669 Q96M66 194 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 HIST1H2AAQ96QV6 131 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 FOXC2Q99958 501 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 TM2D1Q9BX74 207 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 EGLN1Q9GZT9 426 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 RAB1BQ9H0U4 201 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 IFT22Q9H7X7 185 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 FN3KRPQ9HA64 309 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 LIN7BQ9HAP6 207 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 ABRACLQ9P1F3 81 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 RCC2Q9P258 522 aaKnown RBP8.86□□□□□ -0.99
VPS33A-204ENST00000540669 MRPS28Q9Y2Q9 187 aaKnown RBP8.86□□□□□ -0.99
VPS33A-204ENST00000540669 ETV7Q9Y603 341 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 ZNF469Q96JG9 3925 aaPredicted RBP8.86□□□□□ -0.99
VPS33A-204ENST00000540669 MYO9AB2RTY4 2548 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 CELSR1Q9NYQ6 3014 aa8.86□□□□□ -0.99
VPS33A-204ENST00000540669 FLNAP21333 2647 aaKnown RBP8.85□□□□□ -0.99
VPS33A-204ENST00000540669 A0A0A6YYD4 124 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 A0A0B4J203 849 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 IGHV1-69-2A0A0G2JMI3 117 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 TMEM272A0A1B0GTI8 110 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 A0A1W2PP11 408 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 MAGEB3O15480 346 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 AKR7A2O43488 359 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 ZNF780AO75290 641 aaPredicted RBP8.85□□□□□ -0.99
VPS33A-204ENST00000540669 AMY2BP19961 511 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 RAB6AP20340 208 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 PTH2RP49190 550 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 POU3F4P49335 361 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 CLDN12P56749 244 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 HOXA4Q00056 320 aaPredicted RBP8.85□□□□□ -0.99
VPS33A-204ENST00000540669 PLA2G7Q13093 441 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 IL13RA2Q14627 380 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 ZNF146Q15072 292 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 DEFB113Q30KQ7 82 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 CNPY1Q3B7I2 92 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 HES5Q5TA89 166 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 STUMQ69YW2 141 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 MKXQ8IYA7 352 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 PNLDC1Q8NA58 520 aaKnown RBP8.85□□□□□ -0.99
VPS33A-204ENST00000540669 OR51F2Q8NH61 342 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 ACOT12Q8WYK0 555 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 RDH5Q92781 318 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 HPS1Q92902 700 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 CEP19Q96LK0 163 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 CMTM3Q96MX0 182 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 WDFY2Q96P53 400 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 LPAR5Q9H1C0 372 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 MIXL1Q9H2W2 232 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 KCNK15Q9H427 330 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 SMURF1Q9HCE7 757 aa8.85□□□□□ -0.99
VPS33A-204ENST00000540669 HMG20AQ9NP66 347 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms