RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 DUX4L3P0CJ86 424 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 DUX4L4P0CJ87 422 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 DUX4L5P0CJ88 424 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 DUX4L6P0CJ89 424 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 DUX4L7P0CJ90 424 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 MMP9P14780 707 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 VHLP40337 213 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 TGM4P49221 684 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 BPIFB3P59826 476 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 NANOS3P60323 173 aaKnown RBP12.31□□□□□ -0.44
USB1-203ENST00000539737 CSNK2BP67870 215 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 ALKBH1Q13686 389 aaKnown RBP12.31□□□□□ -0.44
USB1-203ENST00000539737 TAF9Q16594 264 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 CEP78Q5JTW2 689 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 TMEM42Q69YG0 159 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 DUX4L9Q6RFH8 374 aaPredicted RBP12.31□□□□□ -0.44
USB1-203ENST00000539737 Q6ZSV7 163 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 MOB3CQ70IA8 216 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 STX19Q8N4C7 294 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 ZNF676Q8N7Q3 588 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 PNLDC1Q8NA58 520 aaKnown RBP12.31□□□□□ -0.44
USB1-203ENST00000539737 BPIFB6Q8NFQ5 453 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 OR5A2Q8NGI9 324 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 OR52N1Q8NH53 320 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 GGHQ92820 318 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 LHX4Q969G2 390 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 COMMD4Q9H0A8 199 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 PPP1R3EQ9H7J1 279 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 ISG20L2Q9H9L3 353 aaKnown RBP12.31□□□□□ -0.44
USB1-203ENST00000539737 TCF7L1Q9HCS4 588 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 FRRS1LQ9P0K9 344 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 DUX4Q9UBX2 424 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 PSORS1C1Q9UIG5 152 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 HHLA2Q9UM44 414 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 NOTCH3Q9UM47 2321 aa12.31□□□□□ -0.44
USB1-203ENST00000539737 A0A1W2PRD5 423 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 A0A1W2PRF3 423 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 A0A1W2PRM7 423 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 ANKRD61A6NGH8 418 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 OOEPA6NGQ2 149 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 OR4C45A6NMZ5 311 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 TIMM23O14925 209 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 XPNPEP2O43895 674 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 MYF6P23409 242 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 ETV1P50549 477 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 GPM6AP51674 278 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 ST3GAL4Q11206 333 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 CCDC58Q4VC31 144 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 FAM76BQ5HYJ3 339 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 LAIR2Q6ISS4 152 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 AHSA2Q719I0 299 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 C11orf44Q8N8P7 122 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 OR10Z1Q8NGY1 313 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 LRRC29Q8WV35 223 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 PP6455Q8WZ26 134 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 CHST5Q9GZS9 411 aa12.3□□□□□ -0.44
USB1-203ENST00000539737 A0A1B0GUS0 222 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 ZNF732B4DXR9 585 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 SLC1A7O00341 560 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 TNFRSF13BO14836 293 aaPredicted RBP12.29□□□□□ -0.44
USB1-203ENST00000539737 MYL12BO14950 172 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 TOX4O94842 621 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 SERPINA3P01011 423 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 ZNF20P17024 532 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 MICBQ29980 383 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 C6orf141Q5SZD1 244 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 METTL11BQ5VVY1 283 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 WDR82Q6UXN9 313 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 ZNF826PQ6ZT77 177 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 PNKDQ8N490 385 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 PIP4P2Q8N4L2 257 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 GCSAMQ8N6F7 178 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 OR5AK2Q8NH90 309 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 FGF23Q9GZV9 251 aaPredicted RBP12.29□□□□□ -0.44
USB1-203ENST00000539737 GPR173Q9NS66 373 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 FKBP14Q9NWM8 211 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 SCN3BQ9NY72 215 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 RAB26Q9ULW5 256 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 SLC7A11Q9UPY5 501 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 SIGLEC9Q9Y336 463 aa12.29□□□□□ -0.44
USB1-203ENST00000539737 IGHV3OR15-7A0A075B7D8 119 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 H3BSH0 61 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 CDIPTO14735 213 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 ECDO95905 644 aaPredicted RBP12.28□□□□□ -0.44
USB1-203ENST00000539737 GYPAP02724 150 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 ARF6P62330 175 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 CDK5R1Q15078 307 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 CNN3Q15417 329 aaKnown RBP12.28□□□□□ -0.44
USB1-203ENST00000539737 C11orf91Q3C1V1 193 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 OR2G6Q5TZ20 316 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 RPL22L1Q6P5R6 122 aaKnown RBP12.28□□□□□ -0.44
USB1-203ENST00000539737 Q6ZPA2 131 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 ZNF573Q86YE8 665 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 C11orf53Q8IXP5 236 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 RDH10Q8IZV5 341 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 SCCPDHQ8NBX0 429 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 OR13C3Q8NGS6 347 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 RPL3LQ92901 407 aaKnown RBP12.28□□□□□ -0.44
USB1-203ENST00000539737 MYDGFQ969H8 173 aa12.28□□□□□ -0.44
USB1-203ENST00000539737 WDFY2Q96P53 400 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms