RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 IFI30P13284 250 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 PTNP21246 168 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 IL3RAP26951 378 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 FUSP35637 526 aaKnown RBP eCLIP1.42□□□□□ -2.18
CCDC7-209ENST00000539197 ATP5J2P56134 94 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 CCL15Q16663 113 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 HNRNPA1L2Q32P51 320 aaKnown RBP1.42□□□□□ -2.18
CCDC7-209ENST00000539197 C6orf183Q5T699 404 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 SLC25A25Q6KCM7 469 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 OR2W3Q7Z3T1 314 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 PDCL2Q8N4E4 241 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 CACNG8Q8WXS5 425 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 PEBP4Q96S96 227 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 REEP1Q9H902 201 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 TREX1Q9NSU2 369 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 ADA2Q9NZK5 511 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 ZNF257Q9Y2Q1 563 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 ACOT9Q9Y305 439 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 TRAPPC1Q9Y5R8 145 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 TNIKQ9UKE5 1360 aa1.42□□□□□ -2.18
CCDC7-209ENST00000539197 SSH2Q76I76 1423 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 A0A0B4J2E0 115 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 A0A0J9YYE9 177 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 HACD1B0YJ81 288 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 GMDSO60547 372 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 UPK1BO75841 260 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 ETHE1O95571 254 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 GCGP01275 180 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 TRBC1P01850 177 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 IGHMP01871 453 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 IGKV1-16P04430 117 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 CDK1P06493 297 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 CTSGP08311 255 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 CSKP41240 450 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 OR2B8PP59922 312 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 YWHAEP62258 255 aaKnown RBP1.41□□□□□ -2.18
CCDC7-209ENST00000539197 GRB2P62993 217 aaKnown RBP1.41□□□□□ -2.18
CCDC7-209ENST00000539197 INCA1Q0VD86 236 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 HSP90AA4PQ58FG1 418 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 KDM4DQ6B0I6 523 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 KRTAP5-10Q6L8G5 202 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 C16orf87Q6PH81 154 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 SLC35D2Q76EJ3 337 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 NDUFAF7Q7L592 441 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 CPNE9Q8IYJ1 553 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 EIF4E3Q8N5X7 224 aaKnown RBP1.41□□□□□ -2.18
CCDC7-209ENST00000539197 MITD1Q8WV92 249 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 RXFP2Q8WXD0 754 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 FAM19A4Q96LR4 140 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 GAL3ST2Q9H3Q3 398 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 KIR3DX1Q9H7L2 352 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 IFNKQ9P0W0 207 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 NDRG2Q9UN36 371 aaKnown RBP1.41□□□□□ -2.18
CCDC7-209ENST00000539197 KLF12Q9Y4X4 402 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 OR51B2Q9Y5P1 312 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 ENPP4Q9Y6X5 453 aa1.41□□□□□ -2.18
CCDC7-209ENST00000539197 SPATA31E1Q6ZUB1 1445 aa1.4□□□□□ -2.18
CCDC7-209ENST00000539197 COL5A3P25940 1745 aaPredicted RBP1.4□□□□□ -2.18
CCDC7-209ENST00000539197 DYSFO75923 2080 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 A0A1W2PRF3 423 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 A0A1W2PRM7 423 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 DFFAO00273 331 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 SMC2O95347 1197 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 PLEKHA8P1O95397 391 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 LCA5LO95447 670 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 CXorf1O96002 111 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 GFAPP14136 432 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 HOXB8P17481 243 aaPredicted RBP1.4□□□□□ -2.19
CCDC7-209ENST00000539197 CXCR1P25024 350 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 IVDP26440 423 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 NUP62P37198 522 aaPredicted RBP1.4□□□□□ -2.19
CCDC7-209ENST00000539197 LGALS7P47929 136 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 C2orf54Q08AI8 447 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 NDUFAF6Q330K2 333 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 KRTAP25-1Q3LHN0 102 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 THOC7Q6I9Y2 204 aaKnown RBP1.4□□□□□ -2.19
CCDC7-209ENST00000539197 FAM58AQ8N1B3 248 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 ARHGAP18Q8N392 663 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 ASCC1Q8N9N2 400 aaKnown RBP1.4□□□□□ -2.19
CCDC7-209ENST00000539197 OR13C9Q8NGT0 318 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 FAM131CQ96AQ9 280 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 RNF170Q96K19 258 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 DERL3Q96Q80 235 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 GABRG3Q99928 467 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 ARMC7Q9H6L4 198 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 FAM60AQ9NP50 221 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 LZTFL1Q9NQ48 299 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 CA10Q9NS85 328 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 TMEM100Q9NV29 134 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 FLVCR2Q9UPI3 526 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 BZW2Q9Y6E2 419 aaKnown RBP1.4□□□□□ -2.19
CCDC7-209ENST00000539197 VWA8A3KMH1 1905 aa1.4□□□□□ -2.19
CCDC7-209ENST00000539197 JCADQ9P266 1359 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 IGHV6-1A0A0B4J1U7 121 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 MYBPHLA2RUH7 354 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 TVP23AA6NH52 213 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 LINC01619G3V211 115 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 H3BQ85 93 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 K7EN84 100 aa1.39□□□□□ -2.19
CCDC7-209ENST00000539197 NDUFS8O00217 210 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms