RNA–Protein interactions for RNA: ENST00000538909.1

CBX3P4-201, Transcript of chromobox 3 pseudogene 4, humanhuman

BASIC

Gene CBX3P4, Length 354 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-201ENST00000538909 CNRIP1Q96F85 164 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CMTM7Q96FZ5 175 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TMEM80Q96HE8 168 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 NARS2Q96I59 477 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ST6GAL2Q96JF0 529 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CXorf58Q96LI9 332 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TEX37Q96LM6 180 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 IMMP1LQ96LU5 166 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 MAGEB18Q96M61 343 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ZNF570Q96NI8 536 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 OR6C1Q96RD1 312 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 DDOQ99489 341 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TSNAXQ99598 290 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 SEPHS2Q99611 448 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 NPAS1Q99742 590 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 NIPSNAP1Q9BPW8 284 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 MICU1Q9BPX6 476 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 EBF4Q9BQW3 602 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 SLC30A2Q9BRI3 323 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ATG101Q9BSB4 218 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 NICN1Q9BSH3 213 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 H2AFJQ9BTM1 129 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 LMF2Q9BU23 707 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PDCD10Q9BUL8 212 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ZNF426Q9BUY5 554 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 VN1R1Q9GZP7 353 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PPIL3Q9H2H8 161 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PPA2Q9H2U2 334 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CLMPQ9H6B4 373 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 KAT8Q9H7Z6 458 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 SIAEQ9HAT2 523 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 BEX1Q9HBH7 125 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PROK2Q9HC23 129 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 HMG20AQ9NP66 347 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 MYNNQ9NPC7 610 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 BIN3Q9NQY0 253 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 NANSQ9NR45 359 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 SDR39U1Q9NRG7 319 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CUTCQ9NTM9 273 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 C14orf105Q9NVL8 296 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 AIG1Q9NVV5 245 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 NECAP2Q9NVZ3 263 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PLEKHJ1Q9NW61 149 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ANKRD10Q9NXR5 420 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 NLKQ9UBE8 527 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 OPTCQ9UBM4 332 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 DHCR7Q9UBM7 475 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 IL17BQ9UHF5 180 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 BTNL2Q9UIR0 455 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 RARRES3Q9UL19 164 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PRPF19Q9UMS4 504 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 COPS3Q9UNS2 423 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FOXJ3Q9UPW0 622 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FOXA2Q9Y261 457 aaPredicted RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 TP53TG5Q9Y2B4 290 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 NTNG1Q9Y2I2 539 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 KCNIP3Q9Y2W7 256 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FAM96BQ9Y3D0 163 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CSAG2Q9Y5P2 127 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 MRPS18BQ9Y676 258 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CDH10Q9Y6N8 788 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 FLNBO75369 2602 aaKnown RBP1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 BAHCC1Q9P281 2608 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 DSPPQ9NZW4 1301 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 CUBNO60494 3623 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 OTOGQ6ZRI0 2925 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 RTTNQ86VV8 2226 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 PKDREJQ9NTG1 2253 aa1.55□□□□□ -2.16
CBX3P4-201ENST00000538909 ZANQ9Y493 2812 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 MYO7BQ6PIF6 2116 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 CADP27708 2225 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 PPIAL4EA0A075B759 164 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 IGHV1-45A0A0A0MS14 117 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 TMEM129A0AVI4 362 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 TMEM213A2RRL7 107 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 HYKKA2RU49 373 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 PSMB11A5LHX3 300 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 CCDC160A6NGH7 325 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 CENPXA8MT69 81 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 EFCAB9A8MZ26 197 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 KLLNB2CW77 178 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 IDSB3KWA1 339 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 NPIPB9F8W1W9 429 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 M0R3G1 203 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 UPK1AO00322 258 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SLC22A1O15245 554 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ERI3O43414 337 aaKnown RBP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 CHST10O43529 356 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SSNA1O43805 119 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SCO2O43819 266 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 PRKYO43930 277 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 FADS1O60427 444 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 PRAF2O60831 178 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 ALOX12BO75342 701 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 RDH16O75452 317 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 KHDRBS3O75525 346 aaKnown RBP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 CREG1O75629 220 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 SCRG1O75711 98 aa1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 EIF3GO75821 320 aaKnown RBP eCLIP1.54□□□□□ -2.16
CBX3P4-201ENST00000538909 OR2B3O76000 313 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms