RNA–Protein interactions for RNA: ENST00000538280.1

DDB1-211, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 227 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-211ENST00000538280 OR2H1Q9GZK4 316 aa8.03□□□□□ -1.12
DDB1-211ENST00000538280 PRDM14Q9GZV8 571 aa8.03□□□□□ -1.12
DDB1-211ENST00000538280 WDR13Q9H1Z4 485 aa8.03□□□□□ -1.12
DDB1-211ENST00000538280 ZNF703Q9H7S9 590 aaPredicted RBP8.03□□□□□ -1.12
DDB1-211ENST00000538280 RNF122Q9H9V4 155 aa8.03□□□□□ -1.12
DDB1-211ENST00000538280 RAB18Q9NP72 206 aa8.03□□□□□ -1.12
DDB1-211ENST00000538280 GPR173Q9NS66 373 aa8.03□□□□□ -1.12
DDB1-211ENST00000538280 DECR2Q9NUI1 292 aa8.03□□□□□ -1.12
DDB1-211ENST00000538280 SDHAF2Q9NX18 166 aa8.03□□□□□ -1.12
DDB1-211ENST00000538280 RASL12Q9NYN1 266 aa8.03□□□□□ -1.12
DDB1-211ENST00000538280 TIMM10BQ9Y5J6 103 aa8.03□□□□□ -1.12
DDB1-211ENST00000538280 IGKV1-27A0A075B6S5 117 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 LOC100509620A0A075B734 347 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 F8VVB4 439 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 F8VWA3 439 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 RPL36A-HNRNPH2H7BZ11 118 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 CDK2AP1O14519 115 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 RLN2P04090 185 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 B4GALT1P15291 398 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 SERPINF1P36955 418 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 DLSTP36957 453 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 LHX2P50458 406 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 SNU13P55769 128 aaKnown RBP8.02□□□□□ -1.13
DDB1-211ENST00000538280 CYCSP99999 105 aaKnown RBP8.02□□□□□ -1.13
DDB1-211ENST00000538280 IL15RAQ13261 267 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 IGF2-ASQ6U949 168 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 CLEC18BQ6UXF7 455 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 COLCA1Q6ZS62 124 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 SKA3Q8IX90 412 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 CSNK2A3Q8NEV1 391 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 PXT1Q8NFP0 134 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 OR2M7Q8NG81 312 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 OR2AE1Q8NHA4 323 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 AKR7LQ8NHP1 331 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 FGFBP3Q8TAT2 258 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 STOML3Q8TAV4 291 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 NPRL2Q8WTW4 380 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 POM121Q96HA1 1249 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 SEC22AQ96IW7 307 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 THOC3Q96J01 351 aaKnown RBP8.02□□□□□ -1.13
DDB1-211ENST00000538280 TECTBQ96PL2 329 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 ALKBH3Q96Q83 286 aaPredicted RBP8.02□□□□□ -1.13
DDB1-211ENST00000538280 FAM173AQ9BQD7 235 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 PDCD10Q9BUL8 212 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 C1QTNF5Q9BXJ0 243 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 GPR87Q9BY21 358 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 METTL9Q9H1A3 318 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 PPA2Q9H2U2 334 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 RDH8Q9NYR8 311 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 FOXJ2Q9P0K8 574 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 LRFN1Q9P244 771 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 MCTS1Q9ULC4 181 aaKnown RBP8.02□□□□□ -1.13
DDB1-211ENST00000538280 EDARQ9UNE0 448 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 SPTA1P02549 2419 aa8.02□□□□□ -1.13
DDB1-211ENST00000538280 SDK2Q58EX2 2172 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 FLNCQ14315 2725 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 IGKV1D-8A0A087WSZ0 117 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 KANTRA0A1W2PQU2 76 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 XRCC2O43543 280 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 TNFSF15O95150 251 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 LCATP04180 440 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 FAM87AP0C7U9 286 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 JMJD7P0C870 316 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 COX5BP10606 129 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 EDN3P14138 238 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 ZNF708P17019 499 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 AKR1C4P17516 323 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 VAMP1P23763 118 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 DTYMKP23919 212 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 PSMB6P28072 239 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 CHATP28329 748 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 PTGER4P35408 488 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 PMELP40967 661 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 HTR5AP47898 357 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 NPY4RP50391 375 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 CLDN18P56856 261 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 FAM3AP98173 230 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 ANKRD55Q3KP44 614 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 RPUSD3Q6P087 351 aaKnown RBP8.01□□□□□ -1.13
DDB1-211ENST00000538280 MOB3CQ70IA8 216 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 GALNTL5Q7Z4T8 443 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 PDZD9Q8IXQ8 264 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 POC1AQ8NBT0 407 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 Q8NFD4 153 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 COQ8AQ8NI60 647 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 THAP6Q8TBB0 222 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 CASTOR1Q8WTX7 329 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 EXTL1Q92935 676 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 ZNF775Q96BV0 537 aaPredicted RBP8.01□□□□□ -1.13
DDB1-211ENST00000538280 MRPS24Q96EL2 167 aaKnown RBP8.01□□□□□ -1.13
DDB1-211ENST00000538280 ZNF845Q96IR2 970 aaPredicted RBP8.01□□□□□ -1.13
DDB1-211ENST00000538280 S100A13Q99584 98 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 VRK1Q99986 396 aaPredicted RBP8.01□□□□□ -1.13
DDB1-211ENST00000538280 RNF126Q9BV68 326 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 DNTTIP1Q9H147 329 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 NARFLQ9H6Q4 476 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 BARX1Q9HBU1 254 aaPredicted RBP8.01□□□□□ -1.13
DDB1-211ENST00000538280 CHMP1AQ9HD42 196 aaPredicted RBP8.01□□□□□ -1.13
DDB1-211ENST00000538280 EHFQ9NZC4 300 aa8.01□□□□□ -1.13
DDB1-211ENST00000538280 MBD2Q9UBB5 411 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms