RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 WFIKKN1Q96NZ8 548 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 NRIP2Q9BQI9 281 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 NDFIP1Q9BT67 221 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 NHSQ6T4R5 1651 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 C11orf94C9JXX5 98 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 ABOP16442 354 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 G6PCP35575 357 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 C1orf140Q5VVS0 124 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 FAM71E1Q6IPT2 247 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 RFLNAQ6ZTI6 216 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 C6orf201Q7Z4U5 140 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 CBARPQ8N350 705 aaPredicted RBP5.1□□□□□ -1.59
CSMD1-215ENST00000537824 OR1L3Q8NH93 324 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 OR51E1Q8TCB6 317 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 RAB7BQ96AH8 199 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 ASB1Q9Y576 335 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 GSTZ1O43708 216 aaPredicted RBP5.1□□□□□ -1.59
CSMD1-215ENST00000537824 LANCL1O43813 399 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 BPIFB3P59826 476 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 PUSL1Q8N0Z8 303 aaKnown RBP5.1□□□□□ -1.59
CSMD1-215ENST00000537824 ARHGAP5-AS1Q96IT6 56 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 ZBTB42B2RXF5 422 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 TMEM189-UBE2V1I3L0A0 370 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 FGF9P31371 208 aaPredicted RBP5.1□□□□□ -1.59
CSMD1-215ENST00000537824 RHOBP62745 196 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 FKBP1BP68106 108 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 RUNX2Q13950 521 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 PRTGQ2VWP7 1150 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 RNF165Q6ZSG1 346 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 USP53Q70EK8 1073 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 SCD5Q86SK9 330 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 NTNG2Q96CW9 530 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 ALG14Q96F25 216 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 OR2D2Q9H210 308 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 KCNK15Q9H427 330 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 FPR2P25090 351 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 KLF9Q13886 244 aaPredicted RBP5.1□□□□□ -1.59
CSMD1-215ENST00000537824 OR1C1Q15619 314 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 SH2D5Q6ZV89 423 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 H1FNTQ75WM6 255 aaPredicted RBP5.1□□□□□ -1.59
CSMD1-215ENST00000537824 FAM219AQ8IW50 185 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 JAM3Q9BX67 310 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 MRPS2Q9Y399 296 aaKnown RBP5.1□□□□□ -1.59
CSMD1-215ENST00000537824 TMEM210A6NLX4 147 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 IFITM10A6NMD0 228 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 ANKRD34CP0C6C1 535 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 PGA3P0DJD8 388 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 FOXK1P85037 733 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 RPL18Q07020 188 aaKnown RBP5.1□□□□□ -1.59
CSMD1-215ENST00000537824 HES1Q14469 280 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 B3GAT1Q9P2W7 334 aa5.1□□□□□ -1.59
CSMD1-215ENST00000537824 TIMM8AO60220 97 aaPredicted RBP5.09□□□□□ -1.59
CSMD1-215ENST00000537824 SFT2D2O95562 160 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 SSX8Q7RTT4 187 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 SLC16A11Q8NCK7 471 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 A0A0G2JLL6 359 aaPredicted RBP5.09□□□□□ -1.59
CSMD1-215ENST00000537824 MT-ATP6P00846 226 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 CRHP06850 196 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 OTX1P32242 354 aaPredicted RBP5.09□□□□□ -1.59
CSMD1-215ENST00000537824 RPS27P42677 84 aaKnown RBP5.09□□□□□ -1.59
CSMD1-215ENST00000537824 TCTN3Q6NUS6 607 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 PRRT2Q7Z6L0 340 aaPredicted RBP5.09□□□□□ -1.59
CSMD1-215ENST00000537824 AMER3Q8N944 861 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 TCTN2Q96GX1 697 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 TAAR6Q96RI8 345 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 ZNF355PQ9NSJ1 428 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 V9GYH0 126 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 TRBV11-1A0A0K0K1C0 115 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 SMIM17P0DL12 118 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 BCL3P20749 454 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 RPL11P62913 178 aaKnown RBP5.09□□□□□ -1.59
CSMD1-215ENST00000537824 EXT1Q16394 746 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 SAPCD1Q5SSQ6 148 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 PDXPQ96GD0 296 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 MPTX1A8MV57 137 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 SLC17A2O00624 439 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 TIAL1Q01085 375 aaKnown RBP eCLIP5.09□□□□□ -1.59
CSMD1-215ENST00000537824 GJC3Q8NFK1 279 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 OR4B1Q8NGF8 309 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 SFXN1Q9H9B4 322 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 TCRBV21S2A2A0A5A6 115 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 SNCGO76070 127 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 PABPC1L2AQ5JQF8 200 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 DCAF12L2Q5VW00 463 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 MRGPREQ86SM8 312 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 ATOH7Q8N100 152 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 SYS1Q8N2H4 156 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 ZNF740Q8NDX6 193 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 OR1L4Q8NGR5 311 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 CALHM2Q9HA72 323 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 IL19Q9UHD0 177 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 AAED1Q7RTV5 226 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 TCEAL8Q8IYN2 117 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 OR2J1Q9GZK6 312 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 LOC107984156A0A0G2JMH3 177 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 LRRC3CA6NJW4 275 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 TRMT12Q53H54 448 aaKnown RBP5.09□□□□□ -1.59
CSMD1-215ENST00000537824 TEX30Q5JUR7 227 aa5.09□□□□□ -1.59
CSMD1-215ENST00000537824 TSEN54Q7Z6J9 526 aaKnown RBP5.09□□□□□ -1.59
CSMD1-215ENST00000537824 ARL17AQ8IVW1 177 aa5.09□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms