RNA–Protein interactions for RNA: ENST00000537556.1

SRGAP1-202, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 2

Gene SRGAP1, Length 2,976 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-202ENST00000537556 OR14C36Q8NHC7 312 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 FAM3CQ92520 227 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 SLAMF6Q96DU3 332 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 DNAJA3Q96EY1 480 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 SLC35A4Q96G79 324 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 EHFQ9NZC4 300 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 MRPS16Q9Y3D3 137 aaKnown RBP7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 ENTPD2Q9Y5L3 495 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 NUP210LQ5VU65 1888 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 LTBP3Q9NS15 1303 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 SCN5AQ14524 2016 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 OR5B21A6NL26 309 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 CORTO00230 105 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 CD55P08174 381 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 GNRHRP30968 328 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 PTGER1P34995 402 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 SSR2P43308 183 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 CRYBB1P53674 252 aaPredicted RBP7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 ADIRFQ15847 76 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 TRMT12Q53H54 448 aaKnown RBP7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 WDR38Q5JTN6 314 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 MRPL2Q5T653 305 aaKnown RBP7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 CNKSR3Q6P9H4 555 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 ERN2Q76MJ5 926 aaKnown RBP7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 NIT1Q86X76 327 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 SLC38A9Q8NBW4 561 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 PINX1Q96BK5 328 aaKnown RBP7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 SLC25A44Q96H78 314 aaPredicted RBP7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 MEGF9Q9H1U4 602 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 KLHDC2Q9Y2U9 406 aa7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 MDC1Q14676 2089 aaKnown RBP7.51□□□□□ -1.21
SRGAP1-202ENST00000537556 TRAV1-1A0A0B4J248 108 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 SERPINE3A8MV23 424 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 C9orf172C9J069 976 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 IFNL4K9M1U5 179 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 C8AP07357 584 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 GNB3P16520 340 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 SFTPDP35247 375 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 SRP14P37108 136 aaKnown RBP7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 VIPR2P41587 438 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 ECI1P42126 302 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 GABRA2P47869 451 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 DNASE1L1P49184 302 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 PRLHRP49683 370 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 CLDN2P57739 230 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 LCN2P80188 198 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 HYAL1Q12794 435 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 FHL1Q13642 323 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 BSXQ3C1V8 233 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 SPATA45Q537H7 98 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 RFLNAQ6ZTI6 216 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 Q6ZWC4 215 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 CENPVQ7Z7K6 275 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 LHFPL1Q86WI0 220 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 NLRC5Q86WI3 1866 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 TMEM256Q8N2U0 113 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 C17orf78Q8N4C9 275 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 OR5AU1Q8NGC0 362 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 ZNF596Q8TC21 504 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 ANAPC16Q96DE5 110 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 OR51I2Q9H344 312 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 WDR76Q9H967 626 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 TAS2R4Q9NYW5 299 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 GNG13Q9P2W3 67 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 PRSS50Q9UI38 385 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 NUP210Q8TEM1 1887 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 NUMA1Q14980 2115 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 A0A1W2PRS3 328 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 GLOD5A6NK44 160 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 ST8SIA3O43173 380 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 IGLC2P0DOY2 106 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 IGLC3P0DOY3 106 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 IGFBP3P17936 291 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 VASPP50552 380 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 MTCP1P56278 107 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 GNMTQ14749 295 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 TCTN1Q2MV58 587 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 TMEM123Q8N131 208 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 OR4S2Q8NH73 311 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 CNRIP1Q96F85 164 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 LPAR5Q9H1C0 372 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 MRPL27Q9P0M9 148 aaKnown RBP7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 CXXC1Q9P0U4 656 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 DENND4CQ5VZ89 1909 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 WIPF3A6NGB9 483 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 BCL2P10415 239 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 FAHP16930 419 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 ALOX5APP20292 161 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 HINT1P49773 126 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 APOBEC3FQ8IUX4 373 aaKnown RBP7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 FBXL14Q8N1E6 418 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 PNKDQ8N490 385 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 TCTEX1D1Q8N7M0 179 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 SLC16A11Q8NCK7 471 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 OR52R1Q8NGF1 315 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 OR6N2Q8NGY6 317 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 ZNF689Q96CS4 500 aaPredicted RBP7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 SUSD3Q96L08 255 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 RASL10BQ96S79 203 aa7.5□□□□□ -1.21
SRGAP1-202ENST00000537556 HSPB9Q9BQS6 159 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms