RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 P2RY1P47900 373 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 SHHQ15465 462 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 THSD4Q6ZMP0 1018 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 REEP6Q96HR9 211 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 SLC22A12Q96S37 553 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF331Q9NQX6 463 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 PTPRDP23468 1912 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 PLXNA3P51805 1871 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 C9J4A7 227 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 TP53I11O14683 189 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 UTS2O95399 124 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 DTYMKP23919 212 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 POLR2HP52434 150 aaKnown RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF133P52736 654 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 MSMO1Q15800 293 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 CST6Q15828 149 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 GTF2H5Q6ZYL4 71 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 RFLNBQ8N5W9 214 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 SLC38A9Q8NBW4 561 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 MRGPRDQ8TDS7 321 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 RCC1LQ96I51 464 aaKnown RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 SOX7Q9BT81 388 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 LRIT1Q9P2V4 623 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 ICAM5Q9UMF0 924 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 C19orf53Q9UNZ5 99 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 CHTOPQ9Y3Y2 248 aaKnown RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 ANGPTL7O43827 346 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 DDAH2O95865 285 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 PPP1CBP62140 327 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 ARF6P62330 175 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 TGFBR3Q03167 851 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 TMEM267Q0VDI3 215 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 RTN4RL1Q86UN2 441 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF573Q86YE8 665 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 IL22RA1Q8N6P7 574 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 TSTD1Q8NFU3 115 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 SLAMF6Q96DU3 332 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 PISDQ9UG56 409 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 R4GMQ9 66 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 A0A0J9YY10 115 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 TSPAN2O60636 221 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 ERVK-16P61578 105 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 RPS23P62266 143 aaKnown RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 RPS11P62280 158 aaKnown RBP eCLIP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 RTL10Q7L3V2 364 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 GMPPAQ96IJ6 420 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 LINC00615Q96LM1 132 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 P2RX4Q99571 388 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 LAMTOR5O43504 91 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 FGF17O60258 216 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 CA11O75493 328 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 ZIC2O95409 532 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 HOXB2P14652 356 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 IL2RGP31785 369 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 P2RY2P41231 377 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 OR3A1P47881 315 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 GLIPR1P48060 266 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 GNG10P50151 68 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 TRIM61Q5EBN2 209 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 SPANXN5Q5MJ07 72 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 PTCRAQ6ISU1 281 aaPredicted RBP4.81□□□□□ -1.64
PTPRD-213ENST00000537002 ZG16BQ96DA0 208 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 MUCL1Q96DR8 90 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 PLEKHF2Q9H8W4 249 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 VSIG4Q9Y279 399 aa4.81□□□□□ -1.64
PTPRD-213ENST00000537002 A8MVM7 634 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 TTRP02766 147 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 ID4P47928 161 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 FZD5Q13467 585 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 SHISA6Q6ZSJ9 500 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 PBOV1Q9GZY1 135 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 TBX21Q9UL17 535 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 TRPM7Q96QT4 1865 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 KIAA1324LA8MWY0 1029 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-213ENST00000537002 SPINK4O60575 86 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 PRAMEF4O60810 478 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 HIST1H2BKO60814 126 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 HIST1H2BJP06899 126 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 HIST1H2BOP23527 126 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 HIST1H2BBP33778 126 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 HIST1H2BDP58876 126 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 HIST1H2BCP62807 126 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 HSF1Q00613 529 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF92Q03936 586 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 PLP2Q04941 152 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 KIR2DS3Q14952 304 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 CEBPEQ15744 281 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 HIST2H2BEQ16778 126 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.8□□□□□ -1.64
PTPRD-213ENST00000537002 ARTNQ5T4W7 220 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 ZNF880Q6PDB4 577 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 DEGS2Q6QHC5 323 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 OR10A7Q8NGE5 316 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 HIST1H2BHQ93079 126 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 ADIPOR1Q96A54 375 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 DAZAP1Q96EP5 407 aaKnown RBP4.8□□□□□ -1.64
PTPRD-213ENST00000537002 LRRC3BQ96PB8 259 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 TBX15Q96SF7 602 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 HIST1H2BNQ99877 126 aa4.8□□□□□ -1.64
PTPRD-213ENST00000537002 HIST1H2BMQ99879 126 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms